|
Name : RPA0186 (RPA0186) Accession : NP_945539.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase SDR Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 206908 - 207654 bp Length : 747 bp Strand : - Note : observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished DNA sequence : ATGAACGATCGCGTCGTCATCATCACCGGAGGCAGCCGCGGCATCGGCCGCGCCACCGCGCTGGGTTGTGCGAAGCGCGG CTTCAAGGTCGTGGTCGGCTACGCCAGTAATGCCGCGGCGGCCGACGAGGTGGTGGCCGAGATCGCAGCCAGCAATGGCA AGGCTATCGCGGTGAAATGCGACGTCGGCAGCGAAGCCGACATTCTCGCGCTGTTCGCTGCCGCGGACGCGTTCGGTCCG CTCGGCGCGCTGGTCAATAATGCTGGCATCGTCGGACCGACCGCGCGGGTCGACGAGATGTCGGCCGAACGCATTCAGCG GATGATGGCGGTTAACGTCACCGGCAGCATTCTGTGCGCGCGTGAGGCGGTGAAGCGGATGTCGACCCGGCACGGCGGTA AGGGCGGCGTCATCGTCAATCTGTCATCGGTCGCGGCCAAACTCGGCTCGCCAAATACCTATGTCGACTACGCGGCCTCC AAGGGTGCGGTCGACTCCTTTACGGTCGGGCTCGGCCACGAAGTCGCCGGCGAAGGCATTCGCGTCGCGGCGATCCGGCC TGGATTGATCGATACCGAGATCCACGCCTCGGGCGGCGATCCGGAACGCGCGCATCGGCTCAGCGTCAACGTGCCGATGA AGCGCGTCGGCCGCGCCGAGGAAATCGCCAACGCCGTCGTCTGGCTGCTGTCCGACGAGGCCTCCTATGTCACCAGCGCC ATCATCGACGTGTCGGGGGGACGATAG Protein sequence : MNDRVVIITGGSRGIGRATALGCAKRGFKVVVGYASNAAAADEVVAEIAASNGKAIAVKCDVGSEADILALFAAADAFGP LGALVNNAGIVGPTARVDEMSAERIQRMMAVNVTGSILCAREAVKRMSTRHGGKGGVIVNLSSVAAKLGSPNTYVDYAAS KGAVDSFTVGLGHEVAGEGIRVAAIRPGLIDTEIHASGGDPERAHRLSVNVPMKRVGRAEEIANAVVWLLSDEASYVTSA IIDVSGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 7e-53 | 54 |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 5e-48 | 52 |
