|
Name : RPA1214 (RPA1214) Accession : NP_946565.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1328639 - 1330291 bp Length : 1653 bp Strand : - Note : - DNA sequence : ATGACCGATAACGTCCTCGAAATCGACAACCTCGTCGTCCGCCTCGGCCGCAGCGGGCATGGCGACAAGGTGATCGACGG CATCTCGCTCAACGTGCGGGCCGGCGAGACGATGTGCCTGGTCGGCGAGAGCGGCTCTGGCAAATCGGTGACGTCACTCA CGACCATGGGACTGCTGCCGAAGGGCGTGCTGCAAGCGTCCGGCGGCGAGATCCGGCTGGCCGGCGAGAACGTGCTGGCG GCCAGCGAGCGGCGGCTGCGCCAGCTCCGTGCCTCGCGGATGGCGATGATCTTTCAGGAGCCGATGACGGCGCTGAATCC TGTGGTGCCGGTCGGCAAGCAGATCGACGAGGTGCTGCGCTTCCACACCGACCTGCCCGCGCGCGAGCGCCGCCGCCGCA TCCTCGACATGATGCAGCAGGTGCGGCTGCCGGATGTCGAACGGATCTTCGCATCCTATCCGCACCGGCTATCGGGCGGT CAGCGTCAGCGCATCATGATCGCGATGGCGCTGGTGCTCGAACCGAAACTGCTGATCGCCGACGAGCCGACCACGGCGCT CGACGTCACCACGCAAAAGCAGATCCTGACGCTGATCCGCGAACTGCAGCAGGCGCACGGCACCGCGGTGCTGTTCATCA CCCATGACATGGGCGTGGTCGCCGAGATCGCCGACCGCGTCGCGGTGATGCGGCAGGGCCGGCTGGTCGAGACCGGTCCG CTGGAGGCGGTGCTGCGCCGCCCGCAGATGGAGTACACCCGCAATCTGTTGTCGGCGGTCCCGAGCCTGGTGCCGCGGGC GCCGCGTCCCGCGAACCGCACGCCGGTCGTTCTGGAAGCCAACGAGCTCGGCAAGGTGTATCGCGAACGCTCGTTGCTCG GCCGTCACCGCGAGGTGGTGGCGGCGCAGGACGTGACGCTGACACTGCACAAGGGCCGCACCCTCGGCATCGTCGGCGAA AGCGGCTCGGGCAAATCCACCGTGGCGCGCTGCATCGTCCGGCTGATCGACCCGACCTCGGGGGGCATCCGGCTCGCCGG CCGCGAGATCTCCGAGCTGTCGCGCCGGTTGCTGCGGCCGCATCGGCAGAAGATCCAGATCATCTTTCAGGACCCGTATC GCTCGCTCAATCCGCGCGTCAGCGTCGGTGAGAGCATCGCCGAGGGACCGATCAATTACGGCATGCCGCGCGCCCAGGCG ATGGCCAAGGCACGGCAGTTGCTCGAACTGGTGCATCTGCCGGCGGATGCGATCTCGCGCTTCCCGCATCAGTTCTCCGG CGGTCAGCGCCAGCGCATTGCGATCGCCCGCGCGCTGGCGCTCGATCCCGACGTACTGGTCGCGGACGAAGCGGTGTCGG CGCTCGACGTTTCGGTGCAGGCGCAGGTGCTGAATCTGCTCGACGAGATCCAGACCCGGCTCGGCATCGCGCTGCTATTC ATCACCCACGATCTGCGCGTCGCGGCGCAGATCTGCGACGACGTCGCGGTGATGGAAAAAGGCCGCGTCGTCGAACAGGG CCCCGCCGCCGAAGTGCTGACCCACCCCAAGCAAGCCTACACCCGCCAACTGCTCGAAGCCGCCCCCGGCCGGCATTGGG ACTTCGCCAATTTCCGTCCCGTCCAAGAGGCTCCGCAGGCGGCGGTGAGTTGA Protein sequence : MTDNVLEIDNLVVRLGRSGHGDKVIDGISLNVRAGETMCLVGESGSGKSVTSLTTMGLLPKGVLQASGGEIRLAGENVLA ASERRLRQLRASRMAMIFQEPMTALNPVVPVGKQIDEVLRFHTDLPARERRRRILDMMQQVRLPDVERIFASYPHRLSGG QRQRIMIAMALVLEPKLLIADEPTTALDVTTQKQILTLIRELQQAHGTAVLFITHDMGVVAEIADRVAVMRQGRLVETGP LEAVLRRPQMEYTRNLLSAVPSLVPRAPRPANRTPVVLEANELGKVYRERSLLGRHREVVAAQDVTLTLHKGRTLGIVGE SGSGKSTVARCIVRLIDPTSGGIRLAGREISELSRRLLRPHRQKIQIIFQDPYRSLNPRVSVGESIAEGPINYGMPRAQA MAKARQLLELVHLPADAISRFPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQVLNLLDEIQTRLGIALLF ITHDLRVAAQICDDVAVMEKGRVVEQGPAAEVLTHPKQAYTRQLLEAAPGRHWDFANFRPVQEAPQAAVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-79 | 45 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-79 | 45 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-79 | 45 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-79 | 45 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-92 | 43 |
