Gene Information

Name : RPA1214 (RPA1214)
Accession : NP_946565.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1328639 - 1330291 bp
Length : 1653 bp
Strand : -
Note : -

DNA sequence :
ATGACCGATAACGTCCTCGAAATCGACAACCTCGTCGTCCGCCTCGGCCGCAGCGGGCATGGCGACAAGGTGATCGACGG
CATCTCGCTCAACGTGCGGGCCGGCGAGACGATGTGCCTGGTCGGCGAGAGCGGCTCTGGCAAATCGGTGACGTCACTCA
CGACCATGGGACTGCTGCCGAAGGGCGTGCTGCAAGCGTCCGGCGGCGAGATCCGGCTGGCCGGCGAGAACGTGCTGGCG
GCCAGCGAGCGGCGGCTGCGCCAGCTCCGTGCCTCGCGGATGGCGATGATCTTTCAGGAGCCGATGACGGCGCTGAATCC
TGTGGTGCCGGTCGGCAAGCAGATCGACGAGGTGCTGCGCTTCCACACCGACCTGCCCGCGCGCGAGCGCCGCCGCCGCA
TCCTCGACATGATGCAGCAGGTGCGGCTGCCGGATGTCGAACGGATCTTCGCATCCTATCCGCACCGGCTATCGGGCGGT
CAGCGTCAGCGCATCATGATCGCGATGGCGCTGGTGCTCGAACCGAAACTGCTGATCGCCGACGAGCCGACCACGGCGCT
CGACGTCACCACGCAAAAGCAGATCCTGACGCTGATCCGCGAACTGCAGCAGGCGCACGGCACCGCGGTGCTGTTCATCA
CCCATGACATGGGCGTGGTCGCCGAGATCGCCGACCGCGTCGCGGTGATGCGGCAGGGCCGGCTGGTCGAGACCGGTCCG
CTGGAGGCGGTGCTGCGCCGCCCGCAGATGGAGTACACCCGCAATCTGTTGTCGGCGGTCCCGAGCCTGGTGCCGCGGGC
GCCGCGTCCCGCGAACCGCACGCCGGTCGTTCTGGAAGCCAACGAGCTCGGCAAGGTGTATCGCGAACGCTCGTTGCTCG
GCCGTCACCGCGAGGTGGTGGCGGCGCAGGACGTGACGCTGACACTGCACAAGGGCCGCACCCTCGGCATCGTCGGCGAA
AGCGGCTCGGGCAAATCCACCGTGGCGCGCTGCATCGTCCGGCTGATCGACCCGACCTCGGGGGGCATCCGGCTCGCCGG
CCGCGAGATCTCCGAGCTGTCGCGCCGGTTGCTGCGGCCGCATCGGCAGAAGATCCAGATCATCTTTCAGGACCCGTATC
GCTCGCTCAATCCGCGCGTCAGCGTCGGTGAGAGCATCGCCGAGGGACCGATCAATTACGGCATGCCGCGCGCCCAGGCG
ATGGCCAAGGCACGGCAGTTGCTCGAACTGGTGCATCTGCCGGCGGATGCGATCTCGCGCTTCCCGCATCAGTTCTCCGG
CGGTCAGCGCCAGCGCATTGCGATCGCCCGCGCGCTGGCGCTCGATCCCGACGTACTGGTCGCGGACGAAGCGGTGTCGG
CGCTCGACGTTTCGGTGCAGGCGCAGGTGCTGAATCTGCTCGACGAGATCCAGACCCGGCTCGGCATCGCGCTGCTATTC
ATCACCCACGATCTGCGCGTCGCGGCGCAGATCTGCGACGACGTCGCGGTGATGGAAAAAGGCCGCGTCGTCGAACAGGG
CCCCGCCGCCGAAGTGCTGACCCACCCCAAGCAAGCCTACACCCGCCAACTGCTCGAAGCCGCCCCCGGCCGGCATTGGG
ACTTCGCCAATTTCCGTCCCGTCCAAGAGGCTCCGCAGGCGGCGGTGAGTTGA

Protein sequence :
MTDNVLEIDNLVVRLGRSGHGDKVIDGISLNVRAGETMCLVGESGSGKSVTSLTTMGLLPKGVLQASGGEIRLAGENVLA
ASERRLRQLRASRMAMIFQEPMTALNPVVPVGKQIDEVLRFHTDLPARERRRRILDMMQQVRLPDVERIFASYPHRLSGG
QRQRIMIAMALVLEPKLLIADEPTTALDVTTQKQILTLIRELQQAHGTAVLFITHDMGVVAEIADRVAVMRQGRLVETGP
LEAVLRRPQMEYTRNLLSAVPSLVPRAPRPANRTPVVLEANELGKVYRERSLLGRHREVVAAQDVTLTLHKGRTLGIVGE
SGSGKSTVARCIVRLIDPTSGGIRLAGREISELSRRLLRPHRQKIQIIFQDPYRSLNPRVSVGESIAEGPINYGMPRAQA
MAKARQLLELVHLPADAISRFPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQVLNLLDEIQTRLGIALLF
ITHDLRVAAQICDDVAVMEKGRVVEQGPAAEVLTHPKQAYTRQLLEAAPGRHWDFANFRPVQEAPQAAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-79 45
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-79 45
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-79 45
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-79 45
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-92 43