|
Name : tnpR (ND096) Accession : NP_943127.1 Strain : Genome accession: NC_005244 Putative virulence/resistance : Unknown Product : Tn5501 resolvase Function : - COG functional category : - COG ID : - EC number : - Position : 92514 - 93149 bp Length : 636 bp Strand : + Note : similar to Pseudomonas pseudoalcaligenes Tn5501 resolvase AF028594; InterProScan: IPR006118 Site-specific recombinase DNA sequence : ATGCGGAAACCTGTTTTTGATGGTTATCCGCCTATGTTGGTTGGCTACATGCGCGTGTCGTCGGACTCCGACCGCCAGAG CACGGACTTGCAGCGCGACGCGCTGCTCGCCGCCGGCGTCGATCCGCGTCACCTGTTTGAGGATCGTGCCTCTGGCGCGA AGGATGACCGTGCCGGCTTGGCGCGGGCGCTTGAGTTCGTTCGAGCCGGCGATGTGCTGGTGGTGTGGAAACTCGACCGG CTCGGTCGCTCGCTGTCGCACCTGCTCGCCATTGTGACTTCGCTCAAGGACAAGCGGGTGGCGTTCCGCTCGCTGACAGA GAACCTGGACACTACGACGCCCTCGGGCGAATTCCTGTTCCAGGTGTTCGGTGCGCTCGCGCAGTACGAGCGCGCCTTGA TTCAGGAGCGCGTCGTCGCGGGCTTGGCCGCCGCACGCAAACGCGGCCGGATCGGCGGCCGGCCGCAGGCGATCACTGGT GAGAAGCTGGACGCCATCGTCGCCGCGCTCGATGGCGGCATGTCTAAGGCGGCGGTGTGCCGCAACTTCAATGTCAAGCG CACTACGTTGATCGAAACATTGACGCGAGCAGGTTGGCGTGGTGCGGGAAGGACGGTCGATGAGCAACAAGAATAA Protein sequence : MRKPVFDGYPPMLVGYMRVSSDSDRQSTDLQRDALLAAGVDPRHLFEDRASGAKDDRAGLARALEFVRAGDVLVVWKLDR LGRSLSHLLAIVTSLKDKRVAFRSLTENLDTTTPSGEFLFQVFGALAQYERALIQERVVAGLAAARKRGRIGGRPQAITG EKLDAIVAALDGGMSKAAVCRNFNVKRTTLIETLTRAGWRGAGRTVDEQQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 8e-27 | 50 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 3e-30 | 50 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 3e-30 | 50 |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 2e-30 | 50 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 8e-27 | 49 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 8e-27 | 49 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 3e-25 | 42 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 6e-26 | 42 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 6e-26 | 42 |
