Gene Information

Name : ND079 (ND079)
Accession : NP_943110.1
Strain :
Genome accession: NC_005244
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 78217 - 78603 bp
Length : 387 bp
Strand : -
Note : similar to Ralstonia ISRSO10-transposase OrfA; InterProScan: IPR002514 Transposase, IS3/IS911 family

DNA sequence :
ATGACTAATAGAAACGATAAGGGTGGGGAGCTTTTGGGTCAGGAGCGGCGTCGCCGCTGGAGCCCGGAGCAAAAACTGGC
CATGGTTCGCGAGAGCCTGCAACCGGGGCAAAGCGTCTCGGTGGTGGCTCGACAGAATGGCGTGAATGCCAACCAGTTGT
TTCAGTGGCGCAAGCTCTATCAGAGCGGCAGTCTCTCGGCTGTCAGTGCTGGGGAGAGCGTGGTGCCCGCTTCCGAGCTG
GCCGATGCGCTCAAGCAGATCCGCGAGCTACAGCGCATGCTTGGCAAGAAAACCATGCAGGTCGAGATCCTTCAGGAAGC
TGTGGAGATTGCTCGGTCGCGAAAATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGACCAGTGA

Protein sequence :
MTNRNDKGGELLGQERRRRWSPEQKLAMVRESLQPGQSVSVVARQNGVNANQLFQWRKLYQSGSLSAVSAGESVVPASEL
ADALKQIRELQRMLGKKTMQVEILQEAVEIARSRKWIAHSPLLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-27 66
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-27 66
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 2e-27 66
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 1e-34 65
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 1e-34 65
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-34 65
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 1e-34 65
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 2e-34 65
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 2e-34 65
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-34 65
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 3e-34 65
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 2e-34 65
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 1e-34 65
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 3e-34 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ND079 NP_943110.1 transposase VFG0609 Protein 8e-35 65
ND079 NP_943110.1 transposase VFG0648 Protein 5e-35 65
ND079 NP_943110.1 transposase VFG0622 Protein 8e-35 65