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Name : ND078 (ND078) Accession : NP_943109.1 Strain : Genome accession: NC_005244 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 77552 - 78259 bp Length : 708 bp Strand : - Note : similar to Ralstonia ISRSO10-transposase OrfB; InterProScan: IPR001472 Bipartite nuclear localization signal DNA sequence : ATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGACCAGTGAAGCTGATCAGTGAAAGTCTCGGTGTAGCGCGCTCGCA ATTGACGGTTCGACTCAACCCAAATGCTCAGGTCGAGCGGCGTCGCCCTGCACTGGACGATGCCGCACTGGTCGAAGAAA TTCAGGCTGAAGTGAGTGAACTGCCCAGCTACGGGTACCGCCGTGTGTGGGGGTTGCTGCGTCGTCGGCGTGAAAAGCAG AGTCAGGCGCCGATCAACGTCAAGCGGGTTTATCGCGTCATGCGCGATCATCAGTTGCTGCTGGAGCGACGGATTAAACA ACCGGGTGTGGCACGCCGTCACGAAGGCCGAATTGCCGTGGCCACCAGCGATACCCGGTGGTGCTCGGACGGGTTTGAGT TTCGCTGTGATGATAACGCCAAGCTGAGCGTGACCTTTGCCCTGGACTGCTGCGACCGCGAAGCCATCGGTTGGGTGGCC AGCCCGACCGGGTACAGCGGCGACGATATCCGTGATCTGATGCTGGAGGCGGTGGAAAAACGCTTCGGTGAAGAGGCGCC TGCCACCCCGGTGCAATGGCTGAGCGACAATGGCTCGGCCTACATCGCTGAACAGACACGCCAGTTTGCCCGACAGATCG GCTTGCAACCGCTGACCACGCCGGTGCGTAGCCCGCAGAGCAACGGCATGGCCGAGAGCTCTAGCTGA Protein sequence : MDCALTLVAGGRPVKLISESLGVARSQLTVRLNPNAQVERRRPALDDAALVEEIQAEVSELPSYGYRRVWGLLRRRREKQ SQAPINVKRVYRVMRDHQLLLERRIKQPGVARRHEGRIAVATSDTRWCSDGFEFRCDDNAKLSVTFALDCCDREAIGWVA SPTGYSGDDIRDLMLEAVEKRFGEEAPATPVQWLSDNGSAYIAEQTRQFARQIGLQPLTTPVRSPQSNGMAESSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 6e-48 | 58 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 2e-48 | 58 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 2e-46 | 57 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 5e-47 | 56 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 8e-46 | 56 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 1e-52 | 55 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 6e-53 | 55 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 2e-50 | 53 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 5e-52 | 53 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 5e-52 | 53 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 3e-52 | 53 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 4e-51 | 53 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 5e-52 | 53 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 3e-44 | 52 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 2e-47 | 51 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 2e-47 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ND078 | NP_943109.1 | transposase | VFG0649 | Protein | 7e-47 | 57 |
| ND078 | NP_943109.1 | transposase | VFG1732 | Protein | 2e-53 | 55 |
| ND078 | NP_943109.1 | transposase | VFG0621 | Protein | 2e-52 | 53 |
| ND078 | NP_943109.1 | transposase | VFG0608 | Protein | 2e-52 | 53 |
