Gene Information

Name : tnpA (ND023)
Accession : NP_943156.1
Strain :
Genome accession: NC_005244
Putative virulence/resistance : Unknown
Product : tranposase TnpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 24546 - 25760 bp
Length : 1215 bp
Strand : +
Note : InterProScan: IPR001472 Bipartite nuclear localization signal; tranposase

DNA sequence :
ATGCACTTCCAGGTGGACGTGCCCGATCCCATCGCCTGCGAGGAATGCGGCGTGCAGGGTGAGTTCGTACGGTTCGGCAA
GCGTGACGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACTCTCTGGGTGGTCCGCCGCCGATACACCTGCC
GGGCCTGCAAGACAACATTCAGGCCCCAGCTACCGGTGATGGTGGACGGATTCCGTATGACACTGCGGCTGCATGAGTAC
GTGGAGAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCCTGGACGAGAAGACGGTGCGCGACAT
CTTCAACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGCATCCTGGGCATTGACGAGCTATACC
TGAACAAGCGCTACCGCTGCATTCTGACCAACATTGAGGAGCGAACCCTGCTCGACCTGCTGGCCACCCGCCGCCAGGAC
GTGGTGACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCCTACCG
GGCAGCGGTCAAGGCTGTGCTGCCCCAGGCCCGTATCGTGGTCGATAAGTTCCATGTGGTGCGCATGGCCAACGATGCCC
TAGAGAGAGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCGTCCCAGAGCCGGACTCTCAAGGGAGACCGGAAAATCCTG
CTGAAACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGACAGGCGCGTTCCCGCAACTGCTGGC
CGCCTACGAGCACAAGGAGCGCTTCTACGGCATCTGGGACGCCACCACACGGCTCCAGGCAGAAGCCGCCCTGGACGAGT
GGATAGCCACCATCCCGAAGGGCCAAAAGGAAGTCTGGAGCGATCTGGTCAGGGCAGTGGGAAACTGGCGCGAAGAGACC
ATGACCTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCAACCGACTGGCCAAGGACAAGAACCG
TGAAGGGCGCGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACGAAGCACAAGAAGAAGGCACCGACTG
CGAAGGTCTCTCCTTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTCGCAGAGGAACTCAACTACGGAGTCGAT
CTATCAACCATCTGA

Protein sequence :
MHFQVDVPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRACKTTFRPQLPVMVDGFRMTLRLHEY
VEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQD
VVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKGLRKELKPSQSRTLKGDRKIL
LKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRLQAEAALDEWIATIPKGQKEVWSDLVRAVGNWREET
MTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVD
LSTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 0.0 99
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 0.0 99
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 0.0 99
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 99
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 0.0 99
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 0.0 99
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 0.0 99
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 1e-76 43