Gene Information

Name : pilT (PHG353)
Accession : NP_942988.1
Strain :
Genome accession: NC_005241
Putative virulence/resistance : Virulence
Product : transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 367391 - 367825 bp
Length : 435 bp
Strand : -
Note : Pfam entry PF01464; similar to Ralstonia metallidurans gi:22980939

DNA sequence :
GTGAGGATAGGCGCGATCGCGGTCGTCTGCACGGTCTTGCTGACCGGCGTCGCCCATGCCGACTGCCTGGACGATGCCGC
GGTGTTTCACGGCGTCAGCCCATCTCTGCTGCGGAGTATCGCGATGCAGGAGTCCACCATGCGGCCGTGGGTGACGAGTC
GAAACGCGAACGGGTCGGAGGATATCGGGCTCATGCAGATCAATTCGATCCACCTGCCGCGGCTGAGCCGGTACGGCATC
ACGCGCGCCCACCTGTTTGATGGATGCATCAACGCCTACGTCGGCGCGTGGATTCTGCGCGAGAACATCCAGCGCTTCGG
GCCGACGTGGAAAGCGGTCGGGGCCTACAACGCCTCCTCACCCGACAAGCAGTTGCGCTACGCCAACCAGATTCATGCGC
GGTGGCAGGCGCTGCAGCGCGCCGCCTTGCGGTAG

Protein sequence :
MRIGAIAVVCTVLLTGVAHADCLDDAAVFHGVSPSLLRSIAMQESTMRPWVTSRNANGSEDIGLMQINSIHLPRLSRYGI
TRAHLFDGCINAYVGAWILRENIQRFGPTWKAVGAYNASSPDKQLRYANQIHARWQALQRAALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 3e-24 52
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 2e-24 52
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 2e-24 52
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 6e-24 50
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 9e-24 50
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 3e-23 50
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 5e-15 44
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 5e-15 44
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 4e-15 44
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 4e-15 44
unnamed AAL06358.1 unknown Not tested LEE Protein 4e-12 43
ltgX AAW83060.1 LtgX Not tested GGI Protein 8e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilT NP_942988.1 transglycosylase VFG0539 Protein 1e-15 44