Gene Information

Name : NEQ421 (NEQ421)
Accession : NP_963705.1
Strain : Nanoarchaeum equitans Kin4-M
Genome accession: NC_005213
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 370202 - 370894 bp
Length : 693 bp
Strand : +
Note : Type II (general) secretory pathway (IISP) family protein [Methanosarcina acetivorans]; COG1136: ABC-type transport systems, involved in lipoprotein release, ATPase components; IPR001687: ATP/GTP-binding site motif A (P-loop); IPR003439: ABC transporter;

DNA sequence : 
ATGAAAGTCCTTAAATTAGAAGGAATTAGAAAATCCTATAATGATTTGGTAGTTTTGGATAATATAAATTTAGATATAGA
TGAAGGAGAGTTCGTTTCTATAATGGGGCCGAGTGGTTCTGGAAAAACCACGCTATTAAATATAATGGGTTTGTTAGATA
AACCGGATAAAGGCAAAATAATAATAAAAAACAAAGATGTTACTAATATTTATGATGATAATATTTTGTCCTACATTAGA
GGGAAAGAAATAGGTTTTGTTTTTCAACATAGCTATTTAATACCTGTATTAACAGCTTTGGAAAATGTTTTGTTACCATC
AATATTTATTGGGAGTCCAAATAAAGATAGAGCTAAAAAGTTATTGGATTTGGTAGGCCTAAAAGGTTATTATAATCATT
ATCCCAACCAACTTAGCGGAGGACAACAACAAAGAGTGGCAATAGCGAGAGCTTTAATGAATAACCCATCAATTATTTTA
GCTGACGAGCCCACAGCGAGCTTAGATGTAAAAACAGCAAAAACTATTGTCAACCTATTCAAAGAACTAAACGATAAAGG
CCATACTATAGTTATGGTAACCCATGATCCAAATATAGCGAAATACTCGAAAAGAATTGTTGTATTGTATGGAGGAAAAA
TATTATCGGACAATGCCTCTTTAGAGGAAGCGTTGAAATTGATTGAACAATGA

Protein sequence : 
MKVLKLEGIRKSYNDLVVLDNINLDIDEGEFVSIMGPSGSGKTTLLNIMGLLDKPDKGKIIIKNKDVTNIYDDNILSYIR
GKEIGFVFQHSYLIPVLTALENVLLPSIFIGSPNKDRAKKLLDLVGLKGYYNHYPNQLSGGQQQRVAIARALMNNPSIIL
ADEPTASLDVKTAKTIVNLFKELNDKGHTIVMVTHDPNIAKYSKRIVVLYGGKILSDNASLEEALKLIEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NEQ421 NP_963705.1 hypothetical protein NC_012469.1.7686878. Protein 1e-47 52
NEQ421 NP_963705.1 hypothetical protein CP001581.1.gene798.p Protein 4e-36 44
NEQ421 NP_963705.1 hypothetical protein CP001581.1.gene598.p Protein 1e-38 43
NEQ421 NP_963705.1 hypothetical protein NC_008702.1.4606598. Protein 1e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NEQ421 NP_963705.1 hypothetical protein VFG0869 Protein 5e-26 44