Gene Information

Name : VVA0772 (VVA0772)
Accession : NP_936829.1
Strain :
Genome accession: NC_005140
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 870169 - 870951 bp
Length : 783 bp
Strand : +
Note : identified by GeneMark and Glimmer2; involved in lysophospholipase L1 biosynthesis

DNA sequence :
ATGTTGTATCCTGCACTTAGGCTGTCGCCAAGAATTAACACTTTCTCGGTTGCGTGTGCGACGTTTGAAAGGAAAAACAT
TATAAGTAAGGAAAACAATCTGACCATGCCATCTCCAGTAATTAAAGCGGAATCCGTTAGTAAACAAGTCTCTACTAATA
ATGAGCAGTTAACAATCCTTAAAAATGTAAATGTTGTCATTGAAGAAGGTGAAAGCGTTGCGATTGTCGGTACCTCTGGT
GCCGGGAAGTCTACGCTGATGACGCTTCTGGCTGGTTTAGATGTGGCGACCTCCGGTGACGTCACGTTGTTAGGGCAAGC
ATTATCTCAGCTCGATGATGAACAACGAGCGCAAATTCGTAGCGAACATATTGGTTTTGTGTTTCAGAGTTTTCTCTTAA
TCCCTAGCTTAACAGCCCTACAAAATGTCACGTTGCCATGTTTGTTAAAAGGTGAGGAAGAAGACCACGAGCGAGCCAAA
GCGCTGTTGGCCTCGGTAGGGCTGGCTTCTCGTATTCAACATCTCCCAAGCCAGCTTTCGGGTGGCGAGCAACAGCGCGT
TGCCTTAGCTCGCGCATTCATGACTCAACCTAAAATTTTGTTTGCAGATGAACCAACCGGCAACTTAGACCAACACACCG
CAGAAAAAATCATCGATCTGTTATTCGAGCTGAATCAACAACATGGTACGACGTTAGTGCTTGTGACACACGACGACAAT
CTGGCCAGGCGTTGTCAGAAGGTCATTAAAATGGATGCTGGCCAACTTGTTGGAGAGGGCTAA

Protein sequence :
MLYPALRLSPRINTFSVACATFERKNIISKENNLTMPSPVIKAESVSKQVSTNNEQLTILKNVNVVIEEGESVAIVGTSG
AGKSTLMTLLAGLDVATSGDVTLLGQALSQLDDEQRAQIRSEHIGFVFQSFLLIPSLTALQNVTLPCLLKGEEEDHERAK
ALLASVGLASRIQHLPSQLSGGEQQRVALARAFMTQPKILFADEPTGNLDQHTAEKIIDLLFELNQQHGTTLVLVTHDDN
LARRCQKVIKMDAGQLVGEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA0772 NP_936829.1 ABC transporter ATPase NC_008702.1.4606598. Protein 1e-37 47
VVA0772 NP_936829.1 ABC transporter ATPase NC_012469.1.7686878. Protein 5e-40 43
VVA0772 NP_936829.1 ABC transporter ATPase CP001581.1.gene798.p Protein 2e-37 41