Name : araD (VVA1606) Accession : NP_937662.1 Strain : Genome accession: NC_005140 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 1750057 - 1750749 bp Length : 693 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTATAGCGAACTGAAACAACGCGTGCTCGAAGCCAACCTCAAACTGCCCAAATACGGTTTGGTCACTTTTACTTGGGG CAATGTCTCTGAGATTGACCGTGAACGCGGCGTGATCGCGATTAAGCCATCAGGCGTTGAGTACGAGGGAATGCGGGTAG AACATATCGTTGTCGTTGATCTCGATGGCAACATCATTGAGGGCAACCTGAACCCATCCAGCGATACCGCGACGCATCTC GAAATCTACAAAGCGTTTCCAGACGTTGGGGGCGTGGTTCATACCCACTCACGCAGCGCGACGATTTGGGCACAAGCAGG GATCGACATTCCGGCACTCGGTACCACTCATGCCGACTATTTTTATGGCGACATTCCTTGCACGCGAAAACTGTCGCAAA GCGAGATTGCGCAAGAGTACGAGAAGAACACCGGGTTAGTGATTGTGGAAGAGTTTCGTCATCGTCGCATCGAGCCAATG GCTGTCCCAAGCGTGATTGTCGCAGGTCATGCACCTTTCTCTTGGGGTAGCAATGCCGATGATGCGGTGCACAACGCAGT GGTACTGGAAGAGATTTCGGCCATGGCTCTCGCCACTCGCTCGCTCAACAGCGGCATCAAGATCCAGCCAGAACTGTCAG ACAAACATTACCTGCGTAAGCACGGTGAAAACGCCTACTACGGACAGAGGTAA Protein sequence : MYSELKQRVLEANLKLPKYGLVTFTWGNVSEIDRERGVIAIKPSGVEYEGMRVEHIVVVDLDGNIIEGNLNPSSDTATHL EIYKAFPDVGGVVHTHSRSATIWAQAGIDIPALGTTHADYFYGDIPCTRKLSQSEIAQEYEKNTGLVIVEEFRHRRIEPM AVPSVIVAGHAPFSWGSNADDAVHNAVVLEEISAMALATRSLNSGIKIQPELSDKHYLRKHGENAYYGQR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 5e-63 | 58 |