Gene Information

Name : VVA1202 (VVA1202)
Accession : NP_937258.1
Strain :
Genome accession: NC_005140
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate ABC transporter substrate-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 1322458 - 1323453 bp
Length : 996 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGAAACAAAGGGAAAAGGAACACGCGATGAAAACCATGAACCGAATTACACTCGCTATGCTGACTGTGGGATTGAG
CCTTTCTGCAAATGCAGCAACGACGTTGAAAATGGGAATGCAAGCGTCGGTTGGCTCAGTGGAATACACCTCTGCCAAGC
TGCTTGCCGACACAGTTGAAGAGATGAGTAAGGGTGAGTTGAAGCTAGCGTTATATCCAAGTGCGCAACTGGGCGACGAC
CGTGCCATGTTACAGCAGCTCTCTATGGGTGACTTAGACATCACATACGCGGAATTTGGCCGTATGGGACTTTGGATCCC
AAGAGCAGAAGCGGTGACCTTACCTTACGTTGCTCGTGATTATGACCATTTACGCCGCATGTTTGATTCCGAGTTTGGCC
AAGGCATTCGTCAGGAAATGCTAACCAAGTTTAATTGGCGTGCGCTAGATACTTGGTACAACGGAACACGTGAAACCACC
TCTAACCGTCCATTGAAGTCAATTTCAGATTTTAAAGGTCTGAAATTGCGCGTGCCGAATGCGAAACCAAATCTGAATTA
CGCCAAGTTGTCTGGGGCATCACCAACACCGATGGCATTTTCTGAAGTTTACCTCGCGCTACAAACCAATGCAGTTGACG
GGCAAGAGAACCCATTGCCAACCATTAAGACAATGAAGTTCTACGAGGTGCAAAGCAACTTGGCGATCACCAATCACATC
GTGAACGACCAGATGGTGCTGATTTCAGAAAGCACGTGGCAAAAGCTCTCCGAGCAGGAACGTGAAATTGTCGCTAACGC
GGTGAAACAAACAGGGGAAGCGCATACCGCATCGGTGAAAAAGCAAGAAGCGGAGCTGATCTCTTTCTTTGAGGCGCAGG
GTGTGAATGTCACCTACCCAGAACTTGCCCCGTTCCGTGAAGCCATGCAGCCGCTTTACTCAGAGTTTGAAAAGAAAATT
GGTCAGCCGATCGTGTCTAAGTTGGCGGCAATGTAG

Protein sequence : 
MVKQREKEHAMKTMNRITLAMLTVGLSLSANAATTLKMGMQASVGSVEYTSAKLLADTVEEMSKGELKLALYPSAQLGDD
RAMLQQLSMGDLDITYAEFGRMGLWIPRAEAVTLPYVARDYDHLRRMFDSEFGQGIRQEMLTKFNWRALDTWYNGTRETT
SNRPLKSISDFKGLKLRVPNAKPNLNYAKLSGASPTPMAFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQSNLAITNHI
VNDQMVLISESTWQKLSEQEREIVANAVKQTGEAHTASVKKQEAELISFFEAQGVNVTYPELAPFREAMQPLYSEFEKKI
GQPIVSKLAAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 2e-132 82
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 2e-132 82
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 4e-134 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA1202 NP_937258.1 C4-dicarboxylate ABC transporter substrate-binding protein VFG1112 Protein 6e-133 82