Gene Information

Name : VVA1200 (VVA1200)
Accession : NP_937256.1
Strain :
Genome accession: NC_005140
Putative virulence/resistance : Virulence
Product : TRAP-type C4-dicarboxylate transport system, large permease component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 1320596 - 1321885 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence : 
GTGGTTATGGCTGGTTCAATTTTTGGTTGGCTAGGCTTGCTTTTTGCTGGCATGCCAGTTGGCTTTTCTCTGATTTTTGT
GGCGTTGGTTTTTCTTATTGTTACCAACAGCACAGGTATTAACTTCGCAGCGCAGCAGATGCTGGGCGGCATCGATAATT
TTACGTTATTGGCCGTACCATTCTTCGTCCTAACGGGCCATTTGATGAACAGTGCCGGTATTACGGAGCGAATTTTTAAC
TTTGCCAAATCCATGGTTGGCCATATCACGGGCAGTCTAGGGCATGTAAACATCATGGCGAGTTTACTCTTTTCTGGTAT
GTCTGGCTCTGCGCTTGCCGATGCCGGAGGCTTGGGGCAGCTTGAAATCAAATCGATGCGTGACGCGAAATACGATGATG
ACTTTGCTGGTGGTCTCACGGCGGCCTCGTGCATCATTGGTCCGCTTGTTCCGCCTTCTGTGCCATTGGTGATTTATGGT
GTAGTGTCCAACACATCGATTGGTGCGCTGTTTTTAGCCGGTGCAATACCAGGCATTTTGTGCTGCGTGGCTTTGATGGT
GATGAGCTATTTCATCTGTAAGAAACGTGGCTACATGACCTTGCCAAAAGCGTCGAGAAAGGAGCAGTTCACATCGTTCA
AAGAGGCATTTCTTTCTCTAATGACTCCGGTCATCATCATTGGCGGGATCTTTTCGGGTAAGTTCACCCCGACGGAGGCG
GCAGTGGTTTCCTCTCTTTACGCTTTGTTCCTTGGTACCGTGGTGTACAAACAGCTGACCTTGACGGGGTTTGTGGAAAT
TCTTCGCGAAACGGTGAATACCACCGCCGTTGTTGCCTTGATGGTGATGGGGGTAACGGTGTTTGGCTGGATCGTGGCGC
GTGAGCAATTACCACAGATGCTTGCGGATTATTTCTTGTCGATCAGTGAAAACCCATTGGTACTACTGCTACTCATCAAC
TTGCTCTTACTGTTTTTGGGAACCTTCATTGAATCACTCGCGCTATTGCTATTGCTGGTTCCATTTTTAGTCCCAGTGGC
ATCGGCGGTCGGGATTGACCCTGTGCACTTTGGTGTTATGGCTATTTTGAACTTGATGATCGGCATTCTCACGCCACCAA
TGGGCATGGCTTTATATGTGGTATCACGTGTCGGAGACATTCCATTTCATACCTTAACTCGAGGCGTACTTCCTCTTCTG
GTGCCATTGTTTATTGTGCTGGCGTTGGTGGCGGTATTCCCTCAAATCACCTTGCTATTGCCTGAGCTGCTTTTGGGTTA
CGGACAATAA

Protein sequence : 
MVMAGSIFGWLGLLFAGMPVGFSLIFVALVFLIVTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSAGITERIFN
FAKSMVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYDDDFAGGLTAASCIIGPLVPPSVPLVIYG
VVSNTSIGALFLAGAIPGILCCVALMVMSYFICKKRGYMTLPKASRKEQFTSFKEAFLSLMTPVIIIGGIFSGKFTPTEA
AVVSSLYALFLGTVVYKQLTLTGFVEILRETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLSISENPLVLLLLIN
LLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLL
VPLFIVLALVAVFPQITLLLPELLLGYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-147 96
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-147 96
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-147 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA1200 NP_937256.1 TRAP-type C4-dicarboxylate transport system, large permease component VFG1110 Protein 1e-147 96