Gene Information

Name : VVA1162 (VVA1162)
Accession : NP_937218.1
Strain :
Genome accession: NC_005140
Putative virulence/resistance : Resistance
Product : acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1286591 - 1287214 bp
Length : 624 bp
Strand : -
Note : isoleucine patch superfamily

DNA sequence :
ATGAATTACTTTGACAGTCCATTTTCGGGTAAGCCTATCCAAGAGCAAATTACCAATCCTAATATCATCGTTGGACGGCA
TAGCTACTACTCTGGCTATTATCATGGCCACGGTTTTGATGATTGCGTGCGTTACCTAAATCCAGAGCGAAATGATGTGG
ACAAACTGATCATCGGTAGCTTTTGCTCAGTTGGCTCAGGCGCGGTGTTCATGATGGCAGGAAACCAAGGCCATAGAACG
GATTGGGTCAGCACTTTTCCTTTCTTCTACCAACAAAATCCTAACTTTTCAGAAGCGAAAGATGGCTTTGTAAGAGCTGG
GGATACGCGCATTGGTCACGATGTATGGATTGGCTCGGAAGCGATGATCATGCCAGGTGTGACGATTGGAGATGGCGCGA
TAATCGCCAGTCGCGCGGTGGTGACCAAAGATGTGGCACCTTATGAGGTAGTGGGTTCAAACCCTGCTAAACACATCAAA
TTTCGTTTTTCTCCCCAAGAGATTGAGATGCTGCAAGAAATGCAATGGTGGCAATGGTCAGATAAACAGCTTGGCCAATG
CATGGCCTTGATGTGCTCGGCAGATATTGAAGGTTTGTATTTGTGGTGGAAGCAAAGCCAATAA

Protein sequence :
MNYFDSPFSGKPIQEQITNPNIIVGRHSYYSGYYHGHGFDDCVRYLNPERNDVDKLIIGSFCSVGSGAVFMMAGNQGHRT
DWVSTFPFFYQQNPNFSEAKDGFVRAGDTRIGHDVWIGSEAMIMPGVTIGDGAIIASRAVVTKDVAPYEVVGSNPAKHIK
FRFSPQEIEMLQEMQWWQWSDKQLGQCMALMCSADIEGLYLWWKQSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 9e-59 67
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 9e-59 67
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-59 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA1162 NP_937218.1 acetyltransferase AY740681.1.gene5.p01 Protein 4e-59 67
VVA1162 NP_937218.1 acetyltransferase AF322577.2.gene4.p01 Protein 4e-59 67
VVA1162 NP_937218.1 acetyltransferase AY123251.gene2.p01 Protein 8e-60 66
VVA1162 NP_937218.1 acetyltransferase JF268688.1.gene6.p01 Protein 1e-57 65
VVA1162 NP_937218.1 acetyltransferase NC_002516.2.878374.p Protein 1e-58 64
VVA1162 NP_937218.1 acetyltransferase CP001581.1.gene990.p Protein 1e-36 46
VVA1162 NP_937218.1 acetyltransferase AM180355.1.gene2499. Protein 9e-29 46
VVA1162 NP_937218.1 acetyltransferase NC_010410.6000796.p0 Protein 5e-28 45
VVA1162 NP_937218.1 acetyltransferase NC_011595.7057349.p0 Protein 5e-28 45