Gene Information

Name : VVA0113 (VVA0113)
Accession : NP_936169.1
Strain :
Genome accession: NC_005140
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 130102 - 130758 bp
Length : 657 bp
Strand : -
Note : containing a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGATTACTACTGATTGAAGACGACACACTGCTTGGCCAATCCATGGTGACTTCGCTAAGTCGCCATGGCTATACGGT
GGATTGGTTAGAAAAAGGCTCAGGCGTCACCAGCGCACTGAAAACCGAAGATTTCACGGCAGTGATCCTCGATTTAACCT
TACCGGATATCGATGGCTTAGACGTGCTGCGCAACATTCGTAGTGCGGGTTTTAACTTGCCTGTGGTGATTTTGACCGCC
AGAGACGACATCAAAGATCGCGTCCAAGGCTTAGACCGAGGCGCGGACGATTATCTGGGCAAACCTTTTGCGCTAGAAGA
GCTGCTGGCCCGTTTGCGCGTGGTGATTCGTCGTCAATCTGGTAGCGCAACGGAAGTGATTGAAGTGGGCGAATTGAACC
TCTCTCTTTCCGACCAATCCATTCGTTATCAAGAGGCCGTTTTAAAACTGACGCGTAACGAATTTAAAATCCTTGCGGCG
TTAATGACCAATGCTGGGCGAGTGATGAGTAAAGATCAGTTGCAGCAGTCTCTGCACGGTTGGGATGACAGCGCCAGCGA
CAACGCCATTGAAGTGCACATTCACAACTTGCGCAAAAAGGCACCCAACGTGCCGATTAAAAATATCCGTGGCGTGGGGT
ACATCATTGAAAAGTAG

Protein sequence : 
MRLLLIEDDTLLGQSMVTSLSRHGYTVDWLEKGSGVTSALKTEDFTAVILDLTLPDIDGLDVLRNIRSAGFNLPVVILTA
RDDIKDRVQGLDRGADDYLGKPFALEELLARLRVVIRRQSGSATEVIEVGELNLSLSDQSIRYQEAVLKLTRNEFKILAA
LMTNAGRVMSKDQLQQSLHGWDDSASDNAIEVHIHNLRKKAPNVPIKNIRGVGYIIEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA0113 NP_936169.1 DNA-binding response regulator BAC0487 Protein 1e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VVA0113 NP_936169.1 DNA-binding response regulator VFG0473 Protein 3e-43 42