Gene Information

Name : rdgC (VV0722)
Accession : NP_933515.1
Strain :
Genome accession: NC_005139
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 725690 - 726604 bp
Length : 915 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAACTGTATGGTCTATCGCGTGAATCGCGAGATTGAATTCAACGCAGATCAACTTGAAAAACAATTGGC
AGAGTTCCGTTATACACCTTGTGGCAGCCAGGATAAGCAAAAATTTGGCTGGGTAAGCGCGATGGGACGACACGGTGATA
TGATGACCCACGTGTCAGAAGACCGCATTCTTATCTGTGCTAAAAAAGAAGAAAAAATGCTGCCCGCTTCGGTGATCAAA
GAATCACTGAATACCAAAGTGGAAGCGATGGAAGCCCAAGAAGGCCGCCCGCTGAAGAAAAAAGAGAAAGAAACTCTTAA
AGAAGAGATCATCATTGATCTTCTACCACGAGCTTTCAGCCGCAGTAATCACACCTATGTGCTCATCTTGCCAAAAGAAG
GGTTTATTTTGGTCGATGCCAGCAGCTACAAAAAAGCAGAAGACGTGCTCGCACTGCTGCGCAAAACCATGGGTAGCCTA
CCTGTTGTACCTGCGATTCCAGAAAAAGCGGTTGAGACCACGTTGACTGAATGGGTAAAAACAGGCCAAACACCACAAGG
TTTCCATTTACTCGATGAAGCCGAACTTAAATCGGTTCTGGAAGATGGCGGCATCATTCGCTGTAAGAAGCAAGAGCTCA
CCAGCGACGAAATTCTCAGTCATATCGCTGCAGATAAAGTTGTGACAAAACTGGCCCTCAATTGGCAAGAGCGATTGGAG
TTTGTTCTGGCTGATGATGCGAGCATCAAACGTTTGAAGTTTTCTGATGAATTGCGCGATCAGAACGACGATATTCCGCG
AGAAGATCAAGCCGCACGCTTTGATGCAGACTTTTCTCTCATGTGTGGCGAGCTGTCTGCATTTTTGCCAAACCTTTTTC
AAGCACTGGGTGGTTTACCTCACCCTAACGCTTAA

Protein sequence :
MWFKNCMVYRVNREIEFNADQLEKQLAEFRYTPCGSQDKQKFGWVSAMGRHGDMMTHVSEDRILICAKKEEKMLPASVIK
ESLNTKVEAMEAQEGRPLKKKEKETLKEEIIIDLLPRAFSRSNHTYVLILPKEGFILVDASSYKKAEDVLALLRKTMGSL
PVVPAIPEKAVETTLTEWVKTGQTPQGFHLLDEAELKSVLEDGGIIRCKKQELTSDEILSHIAADKVVTKLALNWQERLE
FVLADDASIKRLKFSDELRDQNDDIPREDQAARFDADFSLMCGELSAFLPNLFQALGGLPHPNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 5e-70 54