Gene Information

Name : VV0560 (VV0560)
Accession : NP_933353.1
Strain :
Genome accession: NC_005139
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 540909 - 542138 bp
Length : 1230 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAAAAGAGTAGTCCCTTTAACTAACACCCAAGTTAAACAAGCTAAAGAATCTGACAAAGAATACACACTCTCTGA
TGGTGACGGCCTTCAATTGCGTGTTAAAACGAATGGCACAAAGTTATGGATTCTGAAATACACTCATCCAATAACCAAAA
AAAGAAACAACATAAGCTTTGGTAGTTTTCCTGATGTCTCTCTTGCCGAGGCAAGGAAAAGACGTTCTGAAGCAAAAACT
CTTTTAGCTCTCAATATCGATCCTAAGCAGCATAAAGATGAACAGCTCTTAAAAGAAAGAGCAGAGCTTGAAAATACCTT
TGGTAAATTTTCTGATAGATGGTTGGCACTCAAGAGAGAGAGCGTAAAACCAGAAACAGCAGATAAAGCTTATCGTGCTC
TTGAGAAACATATCCTACCTAAACTTGGGGATGTCCCCATCCAAGACATCAAACCCAGAACGGTACTCAGTATTCTTGAG
CCAGTAAAAGCACAAGGAACTCTAGAAACAGTTAAAAGACTCTGCCGTATAATCAACGAGGTGATGCGTCTTGCTGTAGC
GTCAGGTGACATTGAAGTAAACTACCTAGCAGACATCACCAAGCTCTTTCCGGCCCCTAAACGCCAGCATATGGTAACTA
TCGAACCAGAAAGGCTACCAGAGTTGATGCAAGCTATAGCTGGTGCAAACATTACGCTATCTACTCGTTGCTTGCTTGAG
TGGCAGCTACACACGATGACGAGACCAATTGAAAGTGCTACAGCACGTTGGCAGGACATTGATTTTGAAAATAAAGTGTG
GGTTGTTCCTGAAGAAAGAATGAAGATGAAGCGTCCCCACACAATCCCTCTTACAGATCAAACTTTGGCACTTTTAGAAA
TAATGAAGCCAATCAGTGGTCATAGAGAATTCATTTTCCCAAGTAACAAAGATCCGAAAAGCCATGTAAATAGTCAGAGT
GCTAATATGGCGCTGAAAAGAATGGGGTTTGAAGGACAATTGGTTTCTCATGGGCTAAGAGCATTAGCAAGTACCACTCT
TAACGAGCAAGGATTCAATCCTGACGTTATTGAAGCCGCATTAGCTCATGTTGATAAGAATGAAGTTAGGAAAGCTTATA
ATCGAGCAGAATATCTTGAGCAACGCAGAAAGCTCATGTGCTGGTGGAGCGATCATATCACCGCTTCTGCCGAGGGAAAT
GTATCACTCGCGAGAAGAAAAGGGTCATGA

Protein sequence : 
MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGSFPDVSLAEARKRRSEAKT
LLALNIDPKQHKDEQLLKERAELENTFGKFSDRWLALKRESVKPETADKAYRALEKHILPKLGDVPIQDIKPRTVLSILE
PVKAQGTLETVKRLCRIINEVMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAGANITLSTRCLLE
WQLHTMTRPIESATARWQDIDFENKVWVVPEERMKMKRPHTIPLTDQTLALLEIMKPISGHREFIFPSNKDPKSHVNSQS
ANMALKRMGFEGQLVSHGLRALASTTLNEQGFNPDVIEAALAHVDKNEVRKAYNRAEYLEQRRKLMCWWSDHITASAEGN
VSLARRKGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 0.0 94
int AAK20773.1 integrase Not tested VPI Protein 5e-115 55
int AAK20803.1 integrase Not tested VPI Protein 5e-115 55
unnamed AAA82714.1 integrase Not tested VPI Protein 5e-115 55
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 7e-115 55
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 7e-115 55
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-96 52
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-96 52
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 4e-97 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VV0560 NP_933353.1 phage integrase VFG1092 Protein 7e-97 52