|
Name : VV0337 (VV0337) Accession : NP_933130.1 Strain : Genome accession: NC_005139 Putative virulence/resistance : Unknown Product : outer membrane capsular polysaccharide transport protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 343944 - 345176 bp Length : 1233 bp Strand : + Note : surface assembly of capsular antigen DNA sequence : ATGCTTTCAAAAGCGTTAGAAAGAAATGGTGTTCAATCGAACCTTTGCTCATTCAAGAGTGCTGTAAACACTCTTAATTT AGACGATTTGGCTTACATGGAACTAAAAACAAAACTTCTGCTAGCGATGCTAGCGCCTGCCTTGCTTGCCGGTTGTACTG TACCCGGCTCACATCTATCCACCGATAATAAAAACCTTGTTGAAGTGAACGATAGCAGCCAAGAAAGTAACCTTTCTGAG GTGGTTAACCTGTATCCGCTAAACGCTCAATCGGTCACGGAATACGCCAAAGCGCAGCATTTTACTTCTCGCGCAAACCC AGAGCTTGATGTGCAGATCGCCCGTTATGAATACAAAGTGGGCCCTGGCGACATTCTTAACGTTACCATTTGGGATCACC CTGAACTGACGATTCCAGCAGGCTCTTACCGCAGTGCATCTGAAGCGGGTAGCTGGGTGCATGCAGATGGCACCATTTTC TACCCATATATTGGCACTGTAGAAGTGGCAGATAAAACCGTGCGTGAGATCCGCGCTGATATCGCTAAACGTCTTGCGAA GTTTATCGAAAGTCCACAGGTCGATGTCAACGTAGCCGCGTTTCGCTCTAAGAAAGCTTACATTACCGGTGAAGTTAAAG TTTCAGGGCAGCAATCGATCACCAATATCCCCTTAACCATTCTTGATGCGGTTAACCGTGCTGGTGGCCTAGCGGAAGAT GCAGATTGGCGTAACGTGACGCTCACTCGCAATGGTGAAGAGCAAACCATTTCTCTTTACGCGCTTATGCAGCGTGGTGA TTTAACGCAAAACCGTTTATTAGAGCCGGGCGATATCATCCACGTGCCACGCAACGACAGCCAAAAAGTGTTTGTAATGG GAGAAGTAAAAGATCCCAAACTGCTTAAAATGGATCGCTCTGGTATGAGCCTGACAGAAGCACTCAGCAGCGTTGGCGGA ATCAACGAGCTCTCTGCCGATGCAACTGGCGTATTCGTCATCCGCACGTCAGACAACAAATCTGAACGCATGGCGGATAT CTACCAGCTCAATATTAAAGATGCCTCTGCACTAGTGATTGGCACCGAATTCGATCTGAAACCATACGATATCGTCTATG TGACCGCCGCACCTATTACTCGATGGAACCGTGTGATCAGTCAGCTAATGCCAACCATTACTGGCTTCAATGAACTAACG GAAGGTGCTCTACGCGTTAAAACGTGGCCGTAA Protein sequence : MLSKALERNGVQSNLCSFKSAVNTLNLDDLAYMELKTKLLLAMLAPALLAGCTVPGSHLSTDNKNLVEVNDSSQESNLSE VVNLYPLNAQSVTEYAKAQHFTSRANPELDVQIARYEYKVGPGDILNVTIWDHPELTIPAGSYRSASEAGSWVHADGTIF YPYIGTVEVADKTVREIRADIAKRLAKFIESPQVDVNVAAFRSKKAYITGEVKVSGQQSITNIPLTILDAVNRAGGLAED ADWRNVTLTRNGEEQTISLYALMQRGDLTQNRLLEPGDIIHVPRNDSQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGG INELSADATGVFVIRTSDNKSERMADIYQLNIKDASALVIGTEFDLKPYDIVYVTAAPITRWNRVISQLMPTITGFNELT EGALRVKTWP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf39 | AAO18064.1 | Orf39 | Not tested | TTSS locus | Protein | 1e-107 | 59 |
