|
Name : VV2979 (VV2979) Accession : NP_935772.1 Strain : Genome accession: NC_005139 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3056522 - 3058009 bp Length : 1488 bp Strand : - Note : unwinds double stranded DNA DNA sequence : TTGTCAGATGGGCAACAAACTCTGCATGCGGAGGCGCGCATCTTAAACCATTTTGAGTATAATGACGCTAAATATAAGTT ACAGAGTGTAGTCATGGCGGATAATCGAAAACGCAAAATTCCGGATAGCCAAGTAGATGCAATAAAAGTTCCTCCTCATT CCTTAGAAGCTGAGCAATCGGTGCTTGGTGGTTTGTTATTGGATAATGAACGTTGGGATACGGTTGCTGAGCGTGTGGTC AGCAAGGACTTTTATAGTCGTCCCCACCGTTTGATTTTCGATGCCATTAAAAGCATTTTGGAAGAGAACAAGCCGCTGGA TCTGATTACCCTGTCCGAGCATTTAGAACGCCGTGAGCAGTTGGAAGATGTCGGTGGTTTTGCGTACCTTGCCGATTTGG CGAAGAACACGCCAAGTGCTGCCAACATTAATGCCTATGCTGATATCGTTGCTGAGCGAGCTTTAGTACGTAATCTGATC AGTGTGGCCAATGAAATTGCGGATGCAGGTTATGATCCTCAAGGCCGTAGTTCGGAAGATCTGCTCGATCTCGCTGAGAG TAAAGTATTCGCCATCGCGGAAGAACGCACCAGCGAAAACGAAGGCCCACAAAATGTCGATTCCATTCTAGAGAAAACCT TAGAACGTATCGAGCTACTGTACAAGAGCCCGCAAGATGGTGTCACCGGGGTGGATACTGGCTTTACGGATCTGAATAAG AAAACCGCAGGTTTGCAAGGCTCTGACCTTATCATTGTCGCCGCACGTCCATCGATGGGTAAAACCACCTTTGCAATGAA CTTGTGTGAAAACGCCGCGATGGATCAAGACAAGCCTGTGCTTATTTTCTCACTGGAGATGCCCGCGGAACAAATCATGA TGCGTATGTTGGCCTCTTTGTCTCGTGTTGACCAAACCAAGATCCGTACCGGTCAGCTGGACGATGAGGATTGGGCGCGT ATTTCTTCGACCATGGGTATTTTGATGGAGAAGAAGAACATGTACATCGATGACAGCTCTGGTCTAACGCCAACGGAAGT GCGTTCACGTGCGCGTCGTGTGGCGCGTGAGCACGGTGGTTTATCGATGATCATGGTCGACTACCTTCAATTGATGCGCG TGCCAGCTCTCTCGGATAACCGTACTTTGGAAATTGCGGAGATTTCTCGCTCACTAAAAGCATTGGCGAAAGAGCTGAAT GTACCCGTGGTGGCCCTGTCGCAGTTGAACCGCTCGCTAGAGCAACGGGCAGACAAACGTCCTGTGAACTCGGATCTGCG TGAATCTGGCTCTATCGAGCAGGACGCCGACTTAATCATGTTCATCTATCGAGACGAAGTATATAACCCTGACAGCGCGC TGAAAGGTACGGCGGAGATCATTATTGGTAAGCAGCGTAACGGTCCTATCGGTTCGGTGCGCCTGACATTCCAAGGACAG TGGTCTCGCTTTGACAATTATGCAGGCCCGGCGTTTGATGATGAGTAA Protein sequence : MSDGQQTLHAEARILNHFEYNDAKYKLQSVVMADNRKRKIPDSQVDAIKVPPHSLEAEQSVLGGLLLDNERWDTVAERVV SKDFYSRPHRLIFDAIKSILEENKPLDLITLSEHLERREQLEDVGGFAYLADLAKNTPSAANINAYADIVAERALVRNLI SVANEIADAGYDPQGRSSEDLLDLAESKVFAIAEERTSENEGPQNVDSILEKTLERIELLYKSPQDGVTGVDTGFTDLNK KTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMDQDKPVLIFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWAR ISSTMGILMEKKNMYIDDSSGLTPTEVRSRARRVAREHGGLSMIMVDYLQLMRVPALSDNRTLEIAEISRSLKALAKELN VPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNPDSALKGTAEIIIGKQRNGPIGSVRLTFQGQ WSRFDNYAGPAFDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-95 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-99 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-99 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-96 | 51 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 9e-99 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-90 | 48 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-85 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 3e-85 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-80 | 47 |
