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Name : fliP (VV2471) Accession : NP_935264.1 Strain : Genome accession: NC_005139 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2505447 - 2506316 bp Length : 870 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAACAATAAGCAACTTCTGACCACGTTTTGGCTATCACTCAGTTTACTGATGGCATCCCTATTTTCCTTTTCGGCTTG GGCACAAGCGGAAGAGACCGCGTTGCCAGCCAATCTTGCACCGGGCGGTAGTGTGACGGTTTCACAAATGCAGAGTGACA CCAGTAAGAGTGAATTTATGAGTGTGGGTAGCGGAGGCGGTATCCCTGCTTTCACCATGACCACCAACCCCGACGGCAGT GAAGACTACTCGGTCACGTTGCAGATTTTAGCTTTAATGACCATGCTTGGCTTCTTGCCAGCGATGGTGATTTTGATGAC CTCATTCACCCGGATTGTGGTGGTGATGTCGATTTTGCGGCAGGCTATGGGTCTGCAACAAACGCCGTCAAACCAGGTCA TTATTGGTATTGCACTCTTCTTAACCTTTTTTATCATGTCGCCCGTGATTAACGAAGTGAATGAACAAGCGGTTCAACCG TACCTGAATGAGCAGCTCACCGCACGCGAAGCGTTTGATGCCGCACAAGGGCCAATGAAAGCGTTCATGCTCAAGCAAAC ACGCGTGAAAGATCTCGAGACATTCGTCAATATGTCAGGAGAGCAGGCCACCAATCCCGAAGACGTTTCTATGGCGGTGT TGATTCCCGCGTTCATCACCTCTGAGCTGAAAACCGCATTCCAAATCGGATTCATGCTGTTTTTGCCGTTCCTTATCATT GACCTTGTGGTGGCTTCGGTATTGATGGCGATGGGTATGATGATGTTGTCACCGATGATCGTCTCGCTGCCGTTTAAGCT GATGTTGTTTGTGTTAGTCGATGGCTGGAACCTGATCCTTTCCACTCTCGCAGGCAGTTTTGCCTTGTAG Protein sequence : MNNKQLLTTFWLSLSLLMASLFSFSAWAQAEETALPANLAPGGSVTVSQMQSDTSKSEFMSVGSGGGIPAFTMTTNPDGS EDYSVTLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFIMSPVINEVNEQAVQP YLNEQLTAREAFDAAQGPMKAFMLKQTRVKDLETFVNMSGEQATNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLII DLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-27 | 43 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-27 | 43 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-27 | 43 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-26 | 43 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-27 | 42 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-27 | 42 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 4e-26 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-26 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-26 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-26 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-26 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-26 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | NP_935264.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-62 | 67 |
| fliP | NP_935264.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 5e-59 | 62 |
| fliP | NP_935264.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 1e-53 | 57 |
| fliP | NP_935264.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-46 | 54 |
| fliP | NP_935264.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 1e-26 | 41 |
