Gene Information

Name : VV2262 (VV2262)
Accession : NP_935055.1
Strain :
Genome accession: NC_005139
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2280454 - 2281686 bp
Length : 1233 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGAATAATCTCACGGCTAGGCAAATCCAAACGGCAAAGCCCAAAGATAAGCTCTACCGTTTATCTGATGGCGGCAA
TCTTTACTTCTGTGTACGTACAAGCAATTCACGTTCTTGGCAGTTTCGTTATAAAAGGCCTGGCCAGGACAAAATCACTT
ATCTTTCCTTTGGTACTTATCCAGATATGTCTTTGGCAGAAGCGCGAGAGAAAGCGTTAGAGGCTCGAAAGATGCTTGCG
GATGGTATTGATCCTCAGTTGGCCAAAGAAGAGCAAAAAGCCAAAGTAATTGTTGAGCAAAATGCGACTTTCAAGTTTGT
TGCTGAACAGTGGAAGGCAACCAAGGAAGGGCAGATAAAAGAGAAGACTCTCAATGGTAACTGGCGCAAACTGGAACTCT
ACGCGTTTCCTAAGTTGGGTACGATACCCGTTAGTAAAATCACGGCGCCTATCGCTATTGCGGCGTTGCGTCCCGTTGAA
ACACAAGGTTTATTAGAAACTGTAAAACGTACCGCCCAACTGATGAATGAGATCATGAATTATGCTGTAAACAGTGGTGT
GATTCATTCTAATCCATTATCTGGTATCCGTGATGTGTTCAAGAAGCACAAAGTAGTGCACATGAAAGCGCTTCAACCTC
ATGAGATGCATGAACTTATTCGAACGGTAGCAACCGCCAATATTCAACACGTGACGCGCTTTTTGATTGAATGGCAGCTT
CATACCATGGTTCGCCCTAATGAAGCGTCAGGTGCTCGCTGGGAAGAAATAGACATGGAAAACCAGCTATGGATTATCCC
GAAAGAGCGCATGAAAATGAACCGTGAACATGTAGTTCCACTTACGACACAAACTCTGGCAATTCTTGAAGCGATCAAGC
CAATTAGCGGACATCGAGACTATATATTTCCTTCAAGCCGTAACCCCAAAGTCCCAACCGATTCAGAAACTGCAAATAAA
GCGCTAGGGCGGATGGGGTTTAAAGATAGGACGACAGCTCACGGCCTTCGTGCTTTGGCCAGTACTACACTTAACGAACA
GGGCTTTGATGCAGATGTTATTGAGGCTGCGCTTGCCCATACGGATAAAAACCAAATACGTAAGGCTTATAATCGTACTG
ACTATTTAGACTCTCGCCGTAAGCTAATGAGCTGGTGGAGTGAGCATATCGACAAATCGAGTTATGGTAGTTACAGCGTT
ACAGGTTCACATCATTTAAGACAGGTTATTTGA

Protein sequence : 
MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRTSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEAREKALEARKMLA
DGIDPQLAKEEQKAKVIVEQNATFKFVAEQWKATKEGQIKEKTLNGNWRKLELYAFPKLGTIPVSKITAPIAIAALRPVE
TQGLLETVKRTAQLMNEIMNYAVNSGVIHSNPLSGIRDVFKKHKVVHMKALQPHEMHELIRTVATANIQHVTRFLIEWQL
HTMVRPNEASGARWEEIDMENQLWIIPKERMKMNREHVVPLTTQTLAILEAIKPISGHRDYIFPSSRNPKVPTDSETANK
ALGRMGFKDRTTAHGLRALASTTLNEQGFDADVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIDKSSYGSYSV
TGSHHLRQVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 7e-179 94
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 7e-179 94
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-178 94
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-102 53
int AAK20773.1 integrase Not tested VPI Protein 9e-103 53
int AAK20803.1 integrase Not tested VPI Protein 9e-103 53
unnamed AAA82714.1 integrase Not tested VPI Protein 9e-103 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-102 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 5e-92 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VV2262 NP_935055.1 phage integrase VFG1092 Protein 3e-179 94