|
Name : VV0216 (VV0216) Accession : NP_933009.1 Strain : Genome accession: NC_005139 Putative virulence/resistance : Virulence Product : type II secretory pathway, component EpsF Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 228703 - 229920 bp Length : 1218 bp Strand : + Note : - DNA sequence : ATGGCGGCGTTTGAATACAAAGCGCTCGACGCAAAAGGGCGCACCAAAAAAGGCACCTTGGAAGGCGACAATGCCCGCCA AGTACGCCAACGCTTGAAAGAGCAAGGCATGGTGCCCATCGAGGTGATGGAAACCAAAGCCAAGTTGGCCAAAAGCAAAT CGTCAGGTGGCTTTAAGCGGGGCATTTCCACTCCCGAATTGTCGTTGATTACTCGCCAGATCTCGACCCTAGTGCAATCT GGCATGCCGCTGGAAGAGTGCCTCAAAGCGGTATCCGATCAAGCAGAGAAGCCTCGTATTCGAGGTATGTTGGCGGCGGT GCGGGCCAAAGTCACAGAAGGTTACACCTTGGCAGACAGCCTGTCAGACTACCCGCATATTTTTGATGAACTGTATCGTT CAATGGTGGCTGCGGGTGAAAAATCGGGTCATTTGGATGCAGTGTTAGAGCGCTTGGCCGATTACTGTGAAAATCGCCAG AAGATGCGTTCTAAGTTACTGCAAGCGATGATTTACCCGGTGGTATTGGTGGTGTTTGCTGTCACGATTGTGGCGTTTTT GCTCGCCACTGTGGTACCCAAAATCGTCGAGCCGATCATCCAAATGGGTCAAGAGCTGCCACAGTCGACGCAATTTTTAT TGGCGGCGAGTGAGTTTGTTCAAGAGTGGGGATTATTGCTGTTGGGAAGCATCGTGTTTGCCATTTACCTACTCAAAACG GCCTTGAAAAAGCCTAATGTTCGCATGGCGTGGGATCGCCGCATCCTGAGCCTGCCGCTACTGGGCAAAATCTCGAAAGG GTTGAACACCGCACGATTTGCTCGCACCTTATCCATTTGTACCTCCAGTGCGATTCCTATTTTGGAAGGAATGCGCGTGG CGGTGGATGTGATGTCGAACCAATTCGTCAAACAACAGGTCTTATTGGCAGCAGACAGCGTGCGTGAAGGGGCCAGTCTG CGTAAAGCTTTGGATCAAACTCGCCTTTTTCCACCAATGATGTTGCACATGATTGCCAGTGGAGAACAAAGTGGTGAGTT GGAAAGCATGCTGACGCGTGCCGCGGACAACCAAGACCAAAGTTTTGAATCGACGGTCAATATCGCGTTGGGTATTTTTA CCCCAGCGTTGATTGCGCTAATGGCGGGATTGGTGTTGTTCATTGTGATGGCGACACTGATGCCGATGCTGGAAATGAAT AATTTAATGAGTGGCTGA Protein sequence : MAAFEYKALDAKGRTKKGTLEGDNARQVRQRLKEQGMVPIEVMETKAKLAKSKSSGGFKRGISTPELSLITRQISTLVQS GMPLEECLKAVSDQAEKPRIRGMLAAVRAKVTEGYTLADSLSDYPHIFDELYRSMVAAGEKSGHLDAVLERLADYCENRQ KMRSKLLQAMIYPVVLVVFAVTIVAFLLATVVPKIVEPIIQMGQELPQSTQFLLAASEFVQEWGLLLLGSIVFAIYLLKT ALKKPNVRMAWDRRILSLPLLGKISKGLNTARFARTLSICTSSAIPILEGMRVAVDVMSNQFVKQQVLLAADSVREGASL RKALDQTRLFPPMMLHMIASGEQSGELESMLTRAADNQDQSFESTVNIALGIFTPALIALMAGLVLFIVMATLMPMLEMN NLMSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 8e-95 | 52 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-93 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VV0216 | NP_933009.1 | type II secretory pathway, component EpsF | VFG2049 | Protein | 3e-90 | 51 |
| VV0216 | NP_933009.1 | type II secretory pathway, component EpsF | VFG0181 | Protein | 4e-84 | 47 |
