Gene Information

Name : VV2251 (VV2251)
Accession : NP_935044.1
Strain :
Genome accession: NC_005139
Putative virulence/resistance : Virulence
Product : DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 2272819 - 2273373 bp
Length : 555 bp
Strand : +
Note : -

DNA sequence :
GTGTTACCCGTAATCAAAATCTCTTCAGGTATATGTCATAGCAGTGAACCTTTCCCTGTATTGCTAAGGAGCCTAGCTAT
GACTCATTTCCCTCGCCGCCGTTATTTATTCTCTCAACGTGCCTATGAGCACCGAGTGCTTGAAGAAGCAGCAGAGATCC
TCGAACAACGTTATGTGCGCGGTGAAGCCTTTACGCGCACGCAAAACACCGCTGATTATCTACGTTGCAAATTGGCCGGA
TACGAGCACGAGGTCTTTGCCGTTTTACTGTTGGATAACCAGCATCGGCTGATTGAATTTAAGGAGCTATTTCGCGGCAC
GGTAGACGCCGCCAACGTCTATCCAAGAGAAGTAGTCAAAGAAGCATTGCACGTTAACGCTGCTGCGGTGATCTTCGCCC
ATAACCACCCATCCGGTGATCCTGAACCATCTCAAGCAGACAAGCGAATAACGGAACGTTTGAAAGATGCATTATCGCTG
GTGGATATTCGCGTGCTAGATCATGTGGTCGTCGGCGAAAGCTGTGTGTCGTTTGCGGAAAGGGGATGGATATGA

Protein sequence :
MLPVIKISSGICHSSEPFPVLLRSLAMTHFPRRRYLFSQRAYEHRVLEEAAEILEQRYVRGEAFTRTQNTADYLRCKLAG
YEHEVFAVLLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADKRITERLKDALSL
VDIRVLDHVVVGESCVSFAERGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-66 90
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-66 90
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-67 86
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 5e-51 74
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 2e-23 52
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 8e-24 51
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 8e-24 51
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 6e-24 51
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 4e-23 50
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 1e-24 49
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 9e-29 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VV2251 NP_935044.1 DNA repair protein VFG1119 Protein 1e-66 90
VV2251 NP_935044.1 DNA repair protein VFG1678 Protein 6e-24 52