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Name : VV1325 (VV1325) Accession : NP_934118.2 Strain : Genome accession: NC_005139 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1353103 - 1354410 bp Length : 1308 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGATTCTAAATTACTTCGTACAGAGCTGGATGAAACAGCTGCTAAACTGGCACGTCGTGGCTTTAAGCTAGACGT AGAGACAATCGGTAAACTTGAAGAACAACGTAAGTCCATTCAAGTAGAAGTTGAAAATTTACAATCCACGCGTAACTCCA TCTCCAAGCAAATCGGTCAACTGATGTCGGCTGGCGACAAAGAAGGCGCAGAAAAGATCAAGCAACAAATCGGGTCATTA GGCTCTGATTTAGATGTGAAAAAAATTGAACTTGACGCGGTGATGGCGCAGTTAGATGACATCATCCTTTCTGTTCCAAA CATTCCTGCGGATGAAGTGCCAAATGGCAAAGACGAGAACGATAATCTTGAGATTTCGCGTTGGGGTGAGCCAAAGTCTT ACGACTTCGAATTAAAAGATCACGTTGACCTAGGTGAAATGGGTGACGGTCTAGATTTCGCAAGCGCAGTTAAGATCACT GGTGCGCGTTTCATCGTGATGAAGGGTCAATTTGCTCGCCTACACCGTGCAATCGCTCAGTTTATGCTTGATCTTCACAC TGAAGAGCATGGCTATACGGAAATGTATGTGCCTTACCTAGTGAACGCAGACAGCTTGTTTGGTACGGGCCAACTACCAA AGTTTGGTAAAGATCTTTTCCACACAGAGCCTCTGACAGAAAAGGCAAGTGATGAAGAGCCACGTAAACTGTCTCTTATC CCTACAGCAGAAGTACCAGTAACGAACCTTGTTCGCGACACGATTTCTGATGAAGCTGATCTGCCGCTTAAGATGACCGC TCACACGCCGTGTTTCCGTTCAGAAGCAGGGTCGTACGGTCGTGACACTCGTGGTCTGATTCGTATGCACCAGTTTGACA AAGTAGAACTGGTACAAATCACCAAACCAGAAGATTCGATGAATGCACTAGAAGAGCTAACTGGCCATGCTGAGAAAGTG CTTCAGCTTCTAGAGTTGCCTTACCGTAAGGTGCTATTGTGTACCGGTGACATGGGCTTTGGCTCGCACAAAACTTACGA TTTGGAAGTATGGGTTCCGGCTCAGAACACTTACCGCGAAATCTCATCTTGTTCAAACATGTGGGATTTCCAAGCGCGTC GTATGCAAGCGCGTTTCCGTCGTAAAGGCGAGAAGAAACCTGAACTTGTACACACACTAAACGGTTCTGGTCTGGCGGTA GGTCGTACCATGGTTGCTATCCTAGAAAACAACCAAGAAGCAGATGGCCGCATTGCCATTCCGACCGTACTTCAGAAGTA CATGGGCGGCGCAACGCACATCGGTTAA Protein sequence : MLDSKLLRTELDETAAKLARRGFKLDVETIGKLEEQRKSIQVEVENLQSTRNSISKQIGQLMSAGDKEGAEKIKQQIGSL GSDLDVKKIELDAVMAQLDDIILSVPNIPADEVPNGKDENDNLEISRWGEPKSYDFELKDHVDLGEMGDGLDFASAVKIT GARFIVMKGQFARLHRAIAQFMLDLHTEEHGYTEMYVPYLVNADSLFGTGQLPKFGKDLFHTEPLTEKASDEEPRKLSLI PTAEVPVTNLVRDTISDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPEDSMNALEELTGHAEKV LQLLELPYRKVLLCTGDMGFGSHKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAV GRTMVAILENNQEADGRIAIPTVLQKYMGGATHIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-94 | 54 |
