Gene Information

Name : rph (plu4870)
Accession : NP_932024.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 5643409 - 5644137 bp
Length : 729 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGCCCAACAGGAAGAGCGGCAGAACAAGTGCGTCCTATCACGATAACCCGTCATTATACTAAGCACGCGGAAGGTTC
GGTTCTAGTAGAGTTTGGCGATACTAAAGTGTTATGTAATGCCTCCGTTGAAGAAGGGGTTCCTCGTTTCTTGAAAGGTC
AGGGGCAGGGCTGGGTGACGGCGGAATATGGCATGTTACCGCGGTCTACTCATACCCGAAATGCTCGTGAAGCAGCTAGA
GGCAAACAGGGCGGGCGTACGATGGAAATCCAGCGTTTAATTGCCCGTTCGCTGCGCGCCGCTGTTGATTTAAAAAAACT
GGGTGAATACACCATTACACTGGATTGTGATGTTATTCAGGCTGATGGCGGTACCCGTACCGCTTCTATTACTGGTGCTT
GTGTCGCGCTAGTTGATGCGTTGAATAAAATAGTTGAAGCAGGCAAGCTGAAAGAGAGTCCTCTGAAATCAATGGTTGCT
GCGGTCTCTGTTGGCATTGTGGATGGTGAAGGTCGTTGTGATCTGGAATATGTGGAAGATTCCGCCGCTGAAACTGATAT
GAACGTCGTGATGATGGAAGATGGCCGGATGATTGAAGTGCAAGGCACTGCGGAAGGCGAGCCATTTAGTCATGATGAGT
TGTTATCCTTATTGGCTCTTGCCAAGGGAGGATTAGAGGATATTTTTGATGCGCAGAGAAATGCGTTAAAACAAAATGCA
TTAAAATAA

Protein sequence :
MRPTGRAAEQVRPITITRHYTKHAEGSVLVEFGDTKVLCNASVEEGVPRFLKGQGQGWVTAEYGMLPRSTHTRNAREAAR
GKQGGRTMEIQRLIARSLRAAVDLKKLGEYTITLDCDVIQADGGTRTASITGACVALVDALNKIVEAGKLKESPLKSMVA
AVSVGIVDGEGRCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHDELLSLLALAKGGLEDIFDAQRNALKQNA
LK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-58 58