Gene Information

Name : hemC (plu4644)
Accession : NP_931806.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 5413407 - 5414348 bp
Length : 942 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCAACTAAAACCATCCGTATCGCAACCCGCCAAAGCCCTTTAGCTATGTGGCAAGCGCTGTATGTTCAGCAAAAACT
GCAACAATGTCACCCAGATCTGGAAGTTCAACTGGTTCCAATGGTAACCCAGGGCGATGTCATTCTGGACACGCCTCTGG
CAAAAATCGGAGGAAAAGGGCTGTTTGTCAAAGAGTTAGAGTTAGCTCTACTTGAAGGCCGAGCCGATATCGCCGTCCAT
TCAATGAAAGACGTCCCGATCTCTTTTCCTGAGGGGCTAGGTCTGGTCACTATTTGTGAACGTGATGATCCTCGTGATGC
TTTCGTCTCTGTGAAATATCACTCTCTGGATGAATTGCCAACAGGCAGCATCGTTGGCACATCAAGTTTACGCCGCCAGT
GTCAACTCCGTGAATTACGTCCTGATCTGATTGTCCGTGACCTTCGGGGCAATGTTGGAACCCGCCTGAACAAGTTGGAT
AATGGTCACTATGATGCAATCATCCTTGCCGTCGCAGGATTGAAAAGGTTAAAACTGCATGAGCGTATCCGTACGCCGTT
GACGGCAGAACAATCATTACCTGCCGTTGGTCAAGGCGCGGTAGGAATTGAATGCCGCCTAGACGACCAACAAACACAAA
CTCTGTTAGCACCATTAAACCACTATGATACAGAAGTTTGTGTTCTTGCCGAACGTGCGATGAATACCCGACTGGAAGGA
GGCTGCCAAGTACCAATAGGTAGCTATGCTATCTGGCAGGACGGGAAAATCTGGTTACGGGCATTAGTTGGCGCACCTGA
TGGTAGCGTTATTATTCGCGGTGAGAGAACAGCTTTACCAAAAGATGCCTGCCAGGCAGGGGTTGAATTGGCAGAAGAGT
TGTTGGAACGGGGAGCACGGGAAATTCTAACCCAAGTTTATCGAGGAAATCCCTCCACATGA

Protein sequence :
MSTKTIRIATRQSPLAMWQALYVQQKLQQCHPDLEVQLVPMVTQGDVILDTPLAKIGGKGLFVKELELALLEGRADIAVH
SMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDELPTGSIVGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLD
NGHYDAIILAVAGLKRLKLHERIRTPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRLEG
GCQVPIGSYAIWQDGKIWLRALVGAPDGSVIIRGERTALPKDACQAGVELAEELLERGAREILTQVYRGNPST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-81 65
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-81 65