Gene Information

Name : plu4280 (plu4280)
Accession : NP_931456.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3209
EC number : -
Position : 5004208 - 5008482 bp
Length : 4275 bp
Strand : -
Note : Similar to Rhs-family protein

DNA sequence :
ATGCCAGAAGCGGCACGGTTGGGTGATACAATAGGCCATTCTGGCGCTTTAGCTGGATTGATTGGTGGGACGATTTTAGG
AGCAGCTATCTCTGCAATTGGCGGTATTGTAGGTGGAGCGCTGTTTGCTGCGGGTATTGCGTCCTCCTGCTTGGGGGTAG
GTATTCTACTTATTGGCCTGTCTGTTGCGGTTGGGATGTTGGCAAGCCATCTGGGGGAAATGGCCCGAGATAACTGTACC
AAATCGGGGGCAGCGTCGCGAAGTCCCTGTGGAACAATTACCCGTGGTTCCTCTAATGTATTTATCAATGGCAAACCGGC
GGCTATCGCAACCTATAGTCAGGTTGGGTGTGACAAGGATGGCACGCGCCAGATGGCTGAAGGCTCCAGTTCTGTTTTTG
TTAATGGTTACCCATTAGCACGGGTCGGGGATAAGACTACGTGTGATGCGGTAGTCATGACCGGTTCTCCGAATGTTTTT
ATCGGCGGCGGCACGAAGCCTACCGAAGCGGTGACGCCAGAAGTGCCGCATTGGGCGTATCAGGTGTCTGACCTCACGAT
ATTGGCGGCTGGGCTTATTAGTTTTGGCGGGGCAGCGGCTAACGGCCCCAGTGCTGTAAAGAAATTGTTTAGTAAAATCC
CTGGCGCGGGGAAAATTGGCAGGATACTGTGCCGCCTGAGTCCGTTGGCTATTGGTGCGTCAGTAGTGGGTATCCTGATG
AATCCAGTAGAAGTGGTAGCCGGACAGAAATTTCTTAATGACGACGACGAACTGGACTTTATCATTGAAGGAGAATTGCC
GCTGTATTGGCAGCGTTCGTACCTGAGTAGTTATGACTATGACAGTGTGTTAGGGCGTAGCTGGAGCCTGTCTTGGGAAA
GCACGCTTACGTCTATTGAAGAGGGAATATTATGGCGTTCACCACTGGGTGAAATTATCCCTTTTCCTGATGTGCCCATC
GGCTATCGCTGTTTCTGCCCGGAAGCACAAAGCTGGCTGATGCATACCCCAGAAGACACTTGGGAAATTCGTGATGCCAG
TGAACATATTTATCATTATCCTGAATTTGGAGCTGATAGTACCAGCCGGCTGAGCCGTATTAGTGATAACGTCGGTAATG
AACAGGTATTCCATTACAACGAATTGCAGCAGATGGTGAATATTACTGGCAGTGGTAAATTAAACCTGCATTGTGACTAT
CTTCTCATTGAACTTGGCGGCAAATCCGTTTCCCGCCTGACCACCGTCTGGCAGGTATTGTATAACGGCAGCCGTGTACT
GCTCTGTCGCTATCACTACAATGAACATGCTCAACTGGTGGGTGTCAGCCATCGGGATGACCATCTTAAGCGCCAGTTTG
GCTGGCATGAAGGGGGATTACTGGCATGGCATCAGGATGCACGTGGGTTACGCTGTGACTACCAATGGGAGCAAACGGAA
GAAGCGCTGTGGCGGGTGATTTCACAGCAGACCAGCGAGGGAGCGGGTTACCGTCTGCATTATGATGAGGAACACCGTGT
TCGTACTGCGCAATGGTATGACGGTACAACGACGGTCTGGACACTCAACGAAGAGCATCAGATTATTCACTGTATGGACC
GTGCGGGCGTGGAGCACCATCTGTTATGGGATGAATTTGGCTTACCGACAGGCTATCGAGATGCCGATGGTAACACGCGA
CGGTGTGAGTGGGATACTCTGGGACGACGGTTGAGTTTTACTGACGGCAATGGTCATCAGACGGGCTGGCAGTATCAAAA
TGACACTGATCGGGTGACGTTTATTTTGTGGCCGGATGGCTGCCAGAGTGTTTTTGAGTATGATGACCGTGGTCGATTAG
TGAGTGAAACCACGCCACTGAAACAGACTACCCGTTACTGTTATGGTCACAATCAGACCTTGCGTCCTTACCTGCGTATC
GATGCCCGGGGCGGAGAGAGCCGTTTTATGTGGAACGATCAGGGGCAGCTTATTCGGCGAACCGACTGTTCGGGCCAGGC
CAGTGAGTGGGGTTATGATATGCAATACCGTGTCAGTCGCTTTACCAATGCCTTGCTGGAAACGACCAGCTATCATTATC
ACGATGATGGACAACTAACACAGGTTACCTATCCTGATGATTCTACTGAACGAATGACTTGGGATAGCGCCGGTCAACTG
TTGAGTTACCAGCGTAACGAAAACGAAGCCCGTTACTGGGAATATAATGTATTGGGGCAGGTGGTTTGTACTACCGACCG
TTTACAGCGGCAAATCCGTTATCATTACACTCCCGAAGGATATTTGGTCAAAATTGACAATGCCAATGGTGACAGTTACA
TCCTGACCCGTGATGCTGAAGGTTGGTTAACGGAAGAAATTCGGCCGGATGAAACCCTGATTTATTATGAATACAACGCC
GCTGGATTACTCAGTACCGAAAGACGCATGGGTGATAGAGTGTTTAAGTACCCGGAGCGTCGGGTACACCACCGTTATGA
TGGCGCTGGAAATCTTATTCAGCGGGAAACGTATACTGATAACTATCAATATCAATGGGACAGCTTGGGGCGGCTGCGAC
AGGCAGAGCGCCAGCCCAATGAAGTTGGAAAAAAACTGGATATTCTGCCGAATACGGTGTGTTTTGAATACGATGCTTTG
GGGCGGGTAACCCGGGAACAAAATGGTGAAAATATCCTCCAGTTTGGTTATGACGAATTAGATAACCTGACGGAACTGAC
CTTACCGCAGGGAGAGACGTTGCACTGGCTCTATTATGGTTCCGGTCATCTCAGCGCTGTTCGTTACAACCAGCAACTGA
TAACGGAATTTGAACGTGATGCCTTGCACCGGGAAACCTGTCGCACACAGGGGGCCTTATTCCAGTATCGCCGCTATGAT
CCGTTGAGTCGTTGTATCAGCCAGTACAGTGTGCCGCAGGCTAACGTTCAGACGGATATAAAACCGGAAATCTGGCAGGG
TAAACCCTGGCGGGCGTGGCATTATGACATTCAGGATGAGCTGTTCCTAAGGGAAGATCATTACTTGGGGAGGGTGAATT
ACTCCTATGATTTAGAAGGCCGTTTGAAAAGCGTAGATAGCACGGATAGTTATCAGGAAATGTTCTGGTATGACGGGGCG
GATAATCTGCTTGAACACCCGCAATCACAGAGAGAGAGGCAGCCGGTAGGGAGCCTTACTCCCCCGGGAGACAGATTAAG
TCAATGGAACAACTGGCAGTACGAGCATGATGAACATGGCAACGTGATTAGCCGTAAAAATATGCAGGGGCAGCGTTACC
GGTACGATGGCGACAACCGACTGACGACAGTGGAAGAGCTGAGTATGAAGGTTGTCTATCACTATGATGCGCTTGGACGC
CGTATCAGTAAGGTGGTGAAAACCGGGATTGGTGGACAGGCACGTTATGAACAAACGGATTTTGTCTGGCATGGTTTGAG
GTTGTTGCAGGATCATGAGTTAAAAACCGGTAAGAGGCAAACCTACTGTTATGAATCTCATGACAGCTACACCCCGCTGG
CGTGTATTGAATCAAGAGGGACCGTGCGTGAGTATTTTTGGTATCACACCGATATTAATGGCGCGCCACTGGAAGTCACG
AATGAGGCGGGAAAAATCGTGTGGTCGGGGAAATACGATGCCTTGGGTAAAATTAGTGGTCTGGCGCTGGCCTATTTTGT
CGATACTGATCGTTCATTCCATGATTTCAAGCAAAACCTGCGTTATGCAGGGCAATATTTTGACAAAGAGACGGGGCTGC
ATTTTAATACGTATCGGTATTACGCCCCAGAGATTGGCCGGTTTATCACACCTGACCCCATTGGATTAGCAGGTGGATTA
AACTTATATACTTACGCGCCTAACCCAATGAGTTGGATCGATCCGTGGGGGTTATACAAGGGTGAGGGACAACGGGGTTT
AGGGAAGTACCATGTCTTCCATGAACACACCCTGAATTCATCGGAATATCAATTATCTGATGGTCAGCACTTTAAACGGG
GCAACCAATCTGTGTACGAAAGAATGCAGCGCGATCCGGCATTCAGACGTGAAATGCAGACTAAATATCCGGGAGTGGTG
GAACATGTTCAGCCAAATTCTAAAGGGAACTTTAGAGGGACTTCACCAAAGAATATGACTTGGCATCATGAGAATCAGCC
AGGGAAATTAAGTCTGGTTGACCGATATGACCATAAGTCCTATCACAAGATTTATCATCCTGATGGGTCAGGTGGTAGAG
ATAAATGGGGAGGTGGGAATAAATGCCGCAAGTAA

Protein sequence :
MPEAARLGDTIGHSGALAGLIGGTILGAAISAIGGIVGGALFAAGIASSCLGVGILLIGLSVAVGMLASHLGEMARDNCT
KSGAASRSPCGTITRGSSNVFINGKPAAIATYSQVGCDKDGTRQMAEGSSSVFVNGYPLARVGDKTTCDAVVMTGSPNVF
IGGGTKPTEAVTPEVPHWAYQVSDLTILAAGLISFGGAAANGPSAVKKLFSKIPGAGKIGRILCRLSPLAIGASVVGILM
NPVEVVAGQKFLNDDDELDFIIEGELPLYWQRSYLSSYDYDSVLGRSWSLSWESTLTSIEEGILWRSPLGEIIPFPDVPI
GYRCFCPEAQSWLMHTPEDTWEIRDASEHIYHYPEFGADSTSRLSRISDNVGNEQVFHYNELQQMVNITGSGKLNLHCDY
LLIELGGKSVSRLTTVWQVLYNGSRVLLCRYHYNEHAQLVGVSHRDDHLKRQFGWHEGGLLAWHQDARGLRCDYQWEQTE
EALWRVISQQTSEGAGYRLHYDEEHRVRTAQWYDGTTTVWTLNEEHQIIHCMDRAGVEHHLLWDEFGLPTGYRDADGNTR
RCEWDTLGRRLSFTDGNGHQTGWQYQNDTDRVTFILWPDGCQSVFEYDDRGRLVSETTPLKQTTRYCYGHNQTLRPYLRI
DARGGESRFMWNDQGQLIRRTDCSGQASEWGYDMQYRVSRFTNALLETTSYHYHDDGQLTQVTYPDDSTERMTWDSAGQL
LSYQRNENEARYWEYNVLGQVVCTTDRLQRQIRYHYTPEGYLVKIDNANGDSYILTRDAEGWLTEEIRPDETLIYYEYNA
AGLLSTERRMGDRVFKYPERRVHHRYDGAGNLIQRETYTDNYQYQWDSLGRLRQAERQPNEVGKKLDILPNTVCFEYDAL
GRVTREQNGENILQFGYDELDNLTELTLPQGETLHWLYYGSGHLSAVRYNQQLITEFERDALHRETCRTQGALFQYRRYD
PLSRCISQYSVPQANVQTDIKPEIWQGKPWRAWHYDIQDELFLREDHYLGRVNYSYDLEGRLKSVDSTDSYQEMFWYDGA
DNLLEHPQSQRERQPVGSLTPPGDRLSQWNNWQYEHDEHGNVISRKNMQGQRYRYDGDNRLTTVEELSMKVVYHYDALGR
RISKVVKTGIGGQARYEQTDFVWHGLRLLQDHELKTGKRQTYCYESHDSYTPLACIESRGTVREYFWYHTDINGAPLEVT
NEAGKIVWSGKYDALGKISGLALAYFVDTDRSFHDFKQNLRYAGQYFDKETGLHFNTYRYYAPEIGRFITPDPIGLAGGL
NLYTYAPNPMSWIDPWGLYKGEGQRGLGKYHVFHEHTLNSSEYQLSDGQHFKRGNQSVYERMQRDPAFRREMQTKYPGVV
EHVQPNSKGNFRGTSPKNMTWHHENQPGKLSLVDRYDHKSYHKIYHPDGSGGRDKWGGGNKCRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3692 YP_001402646.1 RHS/YD repeat-containing protein Not tested YAPI Protein 0.0 55
api89 CAF28563.1 putative membrane-bound sugar-binding protein Not tested YAPI Protein 0.0 54