|
Name : plu0416 (plu0416) Accession : NP_927769.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 443812 - 446400 bp Length : 2589 bp Strand : - Note : Similar to outer membrane usher protein precursor DNA sequence : ATGCCATCGTTACTTTGTGGAGCGAGGGATAGCTCGGTGGCACTGTGTATCTTGTTGGCTCTTTGTCGCGTGCAGGTGGT CAAGGCTGCCGATAGGGTGGAATTCAACACGGATGTTCTTGATGTCAAGGATCGGGCGCGTATTGACTTAAGTCAGTTTT CCCATGCTGGCTACATTATGCAAGGTAGCTACCAGATGGTATTACGCTTGAATAAAAACGAATTGCCCGAGCAGACAGTG CAGTTCATTGCTCCTGATCATGATCCAAAAGGCAGTGAAGCGTGCCTGACGCCGAAGATGGTTGATCAACTGGGGCTTAA AGCGGATGCAATCCGTCAGCTTACTTGGTGGTATAACGGCCAATGCCTAGAAATAGCTTCTCTGAAAGGTATGGAAGTTC GAGGTGACTTGGGCGCTGGGGCACTATACATCAGCATGCCGCAGGCTTACTTAGAATATACCGTAGAAAACTGGGATCCG CCGTCACGTTGGGATAATGGGATCTCCGGTATGTTGTTTGACTACAGCGTCAATGCACAGGTGACAAATCAGTCAGGCGC AGGCAGCCAAGCGCAATCTTTAAGTGGTAACGGAACAGCTGGGGCCAACTTGGGACCTTGGCGTCTGCGGGCTGATTGGC AAGTGCAGTACAGCCATACTACGGGACAGGTAGGAAGTGCCCAGCAAAGCTGGGAGTGGAGCCGCTATTACGCCTACCGT GTGATAGCCGCTCTGCGTGCCAAGCTGACGTTGGCGGAAGACTACCTCAACTCTGGGATGTTTGACAGTTTCCGTTACAT CGGAGCCAGTCTGATATCGGACGACAACATGCTGCCACCGAACCTGCGCGGTTATGCGCCGGAAGTGACAGGGGTGGCGA AGACTAACGCCAAGGTGACCATCAGTCAGCAAGGGCGTGTGATTTATGAAACTCAGGTGGCAGCAGGCCCTTTCAGTATT CAGGATCTGAATACTGCGGTGAATGGCAAGCTGGATGTGAAGGTACAGGAGCAGGATGGCAGCGTACAGACCTTTCAGGT GAATACCGCTAATGTCCCCTATCTGACACGTCCGGGTATGGTTCGTTACAAAATTGCCGCCGGTAAGCCATCAGATATTA AGCATCGCAGTAAAGGGCCGGGCTTTGCAACCGGAGAATTCTCTTGGGGGGTGAACAACGGTTGGTCGCTGTACGGAGGC GCTTTGCTGGCTAGGGGCTATAACGCTCTGGCTATCGGTATCGGCCGTGACTTGCTGGCGTTTGGTGCATTGTCATTTGA TATAACGCAGTCGCGAGCTCAGCTTCTGCATGATGACACCAAACATGGAGGTTCGTATCGGGTTAGCTATTCTAAACGCT TTGACGAATACGACAGCCAGATAACATTTGCAGGTTACCGTTTCTCAGAACGTAACTTCATGAGCATGTCACAGTATTTA GAGGCGCGTTATTACGGTGTCAATAATGGCAGAGGTAAAGAGTTCTATACCATCACGTTTAACAAGCAGTTTAAGGAATT GGGGCTTAGTGTTTATCTGAACTACGGCCATCAGACCTATTGGGACCGTCCGAACAACGATACTTATAACCTGTCACTAT CACGTTATTTCGACATTGGACGCTTTAAAAACATCAGCCTGAGCCTAACGGCATATCGGACTCAGTACAACGGCACTAAT GATGACGGTTTGTATCTGAGTATGGCTGTACCGTGGGGTGAAAATAGCACAATAACCTATGACGGTCAGCTTAGCCGTAA TAGTAGTAATACTGTGGGCTACTATGACCGTATCGATGACAACAATGCATATCGGATTAATGTCGGTAACGGTCAGGGTG GGCGTAGTATTGGCAGTGGTTACTTCACCCATGAGGGGGATATAGCTAAGTTGACAGCGAATGCCAATTTCCGTGGAAGT GAATATAGCGCTATGGGGCTGTCACTTCAGGGGGGAATGACGGCAACGGCAGATGGCGCTGCGCTACACCGTATCAACAT GATAGGGGGAACACGCATGATGATCGACGCTGATGGGATTGGTGGTGTACCAATACGCGGTTATGGCAGTGTGACCCATA CCAACATTTTTGGTAAAGCGGTGGTGAGTGATATCAACAGTTACTACCGCAGCAGCGTTAATGTGGACGTGAACCAACTG GCGGATAACGTGGATGCAACTCGCTCGGTGGTACAAGGCACGCTAACGGAAGGCGCTATTGGTTATCGCAAGTTTGGGAT GATCGCCGGCGAGAAGGCGATGGCCATTATTAAATTGACAGACGGTACGGCTCCTCCATTCGGCGCTATCGTGATGAACG AACGTGAAATGCAAACTGGCATCGTGAATGATGAAGGAAGTGTGTGGTTAACCGGCATTAATCCAGGCGAGAACATGAGT GTGCATTGGGATGGTCGCATACAGTGTCTCATCACATTACCGCAATCTCTTCTAGCCAACTTGATGAATAATCTGTTGTT ACCTTGTCGGCGTGTTAAAGGGAATGATGGTAGTGACGCTGTAGAGACAGTTGTTACACCAGCCAACACAGGTAACGTAG CGAGGATCGGCGGCGAAAATGGCAGGTGA Protein sequence : MPSLLCGARDSSVALCILLALCRVQVVKAADRVEFNTDVLDVKDRARIDLSQFSHAGYIMQGSYQMVLRLNKNELPEQTV QFIAPDHDPKGSEACLTPKMVDQLGLKADAIRQLTWWYNGQCLEIASLKGMEVRGDLGAGALYISMPQAYLEYTVENWDP PSRWDNGISGMLFDYSVNAQVTNQSGAGSQAQSLSGNGTAGANLGPWRLRADWQVQYSHTTGQVGSAQQSWEWSRYYAYR VIAALRAKLTLAEDYLNSGMFDSFRYIGASLISDDNMLPPNLRGYAPEVTGVAKTNAKVTISQQGRVIYETQVAAGPFSI QDLNTAVNGKLDVKVQEQDGSVQTFQVNTANVPYLTRPGMVRYKIAAGKPSDIKHRSKGPGFATGEFSWGVNNGWSLYGG ALLARGYNALAIGIGRDLLAFGALSFDITQSRAQLLHDDTKHGGSYRVSYSKRFDEYDSQITFAGYRFSERNFMSMSQYL EARYYGVNNGRGKEFYTITFNKQFKELGLSVYLNYGHQTYWDRPNNDTYNLSLSRYFDIGRFKNISLSLTAYRTQYNGTN DDGLYLSMAVPWGENSTITYDGQLSRNSSNTVGYYDRIDDNNAYRINVGNGQGGRSIGSGYFTHEGDIAKLTANANFRGS EYSAMGLSLQGGMTATADGAALHRINMIGGTRMMIDADGIGGVPIRGYGSVTHTNIFGKAVVSDINSYYRSSVNVDVNQL ADNVDATRSVVQGTLTEGAIGYRKFGMIAGEKAMAIIKLTDGTAPPFGAIVMNEREMQTGIVNDEGSVWLTGINPGENMS VHWDGRIQCLITLPQSLLANLMNNLLLPCRRVKGNDGSDAVETVVTPANTGNVARIGGENGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 3e-173 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-171 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 1e-171 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 4e-173 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 4e-173 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 4e-173 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| plu0416 | NP_927769.1 | hypothetical protein | VFG1548 | Protein | 2e-173 | 48 |
| plu0416 | NP_927769.1 | hypothetical protein | VFG0884 | Protein | 2e-173 | 48 |
| plu0416 | NP_927769.1 | hypothetical protein | VFG0895 | Protein | 2e-173 | 48 |
