Gene Information

Name : plu0415 (plu0415)
Accession : NP_927768.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 442724 - 443482 bp
Length : 759 bp
Strand : -
Note : Similar to periplasmic fimbrial chaperone precursor MrpD of Proteus mirabilis

DNA sequence : 
ATGAGTATGACAATGAAAAAAAACGCGGCGGCTTCTGCTGTCATGTTGGCCGGTATTCTGGCTGTTCAGCAAGCTAATGC
AGCTATTGCCCTCGATCGCACCCGCGCGGTGTTTAATGGGGAAGATAGATCAATGAGCCTTAGTATCAGTAACCAGAATA
AAGAGTTGCCCTATCTTGCGCAGGCTTGGATTGAGGACGAGCATGGCAACAAGATTAACACTCCACTGACTGCACTACCG
CCACTTCAAAGAGTAGAGCCGGGAGCCAAAAGCCAAGTGAAGTTGCAAGTCACTCAGGGCATCAACATGTTGTCTCAGGA
TAAAGAGACGCTGTTCTATTTCAACCTCCGGGAAATTCCGCCAAAGTCCAACAAACCCAACACATTGCAGATTGCGCTGC
AAACACGTATCAAACTGTTTTATCGGCCAAAGGCTATTACTGTTGGCCGCACGGACTACGAAAATCCTTATCAGGAGAAG
TTGACGATGACTCGACAAGGGGATCGCTATGTAGTGAACAATCCGACGCCATACTACGTGACCATCGCATCAGCATCGTC
CAGCCTAAATGGAACAGCGGTATCCGGTTTTAATCCGATGATGATCCCACCAAAAGGCAGTGCTGTGTTGGGTGGCAGTG
CGTCAGCAATGGGTAACAATCCTGTACTGATTTTCATCAATGATTTCGGTGGTCGGCCAAAATTAGTGTTTGGTTGTAGT
GGTGGCACTTGTACCGTGAAAAGTAGTAAACCCGGTTGA

Protein sequence : 
MSMTMKKNAAASAVMLAGILAVQQANAAIALDRTRAVFNGEDRSMSLSISNQNKELPYLAQAWIEDEHGNKINTPLTALP
PLQRVEPGAKSQVKLQVTQGINMLSQDKETLFYFNLREIPPKSNKPNTLQIALQTRIKLFYRPKAITVGRTDYENPYQEK
LTMTRQGDRYVVNNPTPYYVTIASASSSLNGTAVSGFNPMMIPPKGSAVLGGSASAMGNNPVLIFINDFGGRPKLVFGCS
GGTCTVKSSKPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 6e-50 50
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 3e-58 50
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 4e-58 49
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 4e-58 49
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-58 49
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 3e-58 49
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 3e-58 49
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 2e-58 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
plu0415 NP_927768.1 hypothetical protein VFG0885 Protein 3e-50 50
plu0415 NP_927768.1 hypothetical protein VFG1547 Protein 2e-58 50
plu0415 NP_927768.1 hypothetical protein VFG0896 Protein 2e-58 49