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Name : ribD (plu3899) Accession : NP_931100.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 4570883 - 4571992 bp Length : 1110 bp Strand : - Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : GTGAATAACGATAAAAAATATATGGCGCGCGCTTTGGAATTGGCGCGTCAAGGGCGCTTTACCACGTCACCTAATCCTAA CGTTGGTTGTGTGATTGTGCATGATGGACAAATTGTTGGGGAAGGTTTTCATTTACGTTCTGGTGAGCCGCATGCTGAGG TTTACGCGTTACAGATAGCCGGAGATAAAGCTAAAGGCGCAACTGTTTATGTCACGCTTGAGCCATGCAGCCATCACGGT AAGACCCCGCCTTGTGCCGATGCGTTGATTGCGGCTGGCGTTAGCCGTGTGGTTGCGGCGATGCAGGATCCCAATCCACA GGTAGCAGGAAGAGGGCTTTATAAGCTGCAACAGGCTGGTATTGCAGTAGAACATGGACTGATGATGGAAGAAGCTGAAT CTCTCAACCGGGGGTTTTTGAAGCGGATGCGTACCGGGTTTCCATATATTCAGTTGAAGATGGCGACTTCTCTCGACGGC CGAACGGCATTAGCTTCTGGTGAAAGTAAATGGATTACATCACCACAAGCTCGCTGTGATGTGCAAAAATTCCGTGCTCA ATGTAGCGCGATTCTGAGTTCCAGTAGCACTGTTTTAGCTGATGATCCTCACTTGACAGTTCGTTGGAGTGAATTGGACG CAGAAATTCAGGCGGTTTATCCCGAGGAAAATCTTTGTCAACCGGTACGTGTTATTGTTGACAGTCAGAATCGTGTTAGC CCCCAGCATCAGGTCATACAGCAGCCCGGTTATTGTTGGCTGGCTCGCACTAAAGTAGATGAACATGACTTATCTGAAAA TGTAGAACAGATACTGTTACCTGCTCATGGTATTGGGGTAGATTTGGTGTCATTGATGATGCAGCTGGGTAAGCGCCAGA TCAACACAGTCTGGACTGAGTGTGGGGCATTGCTGGCAGGCGCATTGCTAACTTTAGGGTTGGTGGATGAATTGGTTCTT TATGTTGCGCCAAAAGTGCTAGGTGATACGGCTCGTGGTTTGTTCACTATTCCTGAACTCAAAAATCTGGCAGAGGCACC GGAATTTGACATTTTCGATGTACAGCAAGTTGGGCCTGATCTTCGTCTGCATCTGCGGCCTGTATACTGA Protein sequence : MNNDKKYMARALELARQGRFTTSPNPNVGCVIVHDGQIVGEGFHLRSGEPHAEVYALQIAGDKAKGATVYVTLEPCSHHG KTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLYKLQQAGIAVEHGLMMEEAESLNRGFLKRMRTGFPYIQLKMATSLDG RTALASGESKWITSPQARCDVQKFRAQCSAILSSSSTVLADDPHLTVRWSELDAEIQAVYPEENLCQPVRVIVDSQNRVS PQHQVIQQPGYCWLARTKVDEHDLSENVEQILLPAHGIGVDLVSLMMQLGKRQINTVWTECGALLAGALLTLGLVDELVL YVAPKVLGDTARGLFTIPELKNLAEAPEFDIFDVQQVGPDLRLHLRPVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 7e-58 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 7e-58 | 47 |
