Gene Information

Name : ybbA (plu3817)
Accession : NP_931021.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4486123 - 4486809 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGGTAACGGGGAATATTCTTGAAGTTCAGCATCTCAGTAAGCACGTTGGTCAGGGAGGACATAAGATCACTATATTGCA
GGGAGTTGAGTTGGTTGTCGAGTCGGCACAGACTATCGCTTTGGTGGGAGAGTCGGGTTCGGGTAAATCCACATTGCTTG
GCATTATTGCCGGGTTAGATGATGGCAGTGACGGTGAGGTTCGGCTGCTAGGGCATAATTTAAGCCAGATGAATGAAGAG
CAGCGGGCGCAACTCCGGGCTGAAAGTGTTGGTTTTGTCTTTCAGTCCTTTATGTTAATTCCGACATTAAACGCATTAGA
GAATGTCCAGCTTCCTGCCTTATTACGTGGTGAGTCTGAAAATAGTAGTAGGAAACAGGCGGTTGAATTGCTTGAACAAC
TGGGATTGGGGAAGCGTTTGAAACATATGCCAGCACAACTTTCTGGCGGTGAACAACAGAGAGTGGCATTGGCACGGGCA
TTCAGCAGTCAACCCAAAATTCTGTTTGCTGATGAGCCAACAGGTAATCTGGATCGGCAAACCGGTGATCGTATTGCTGA
TTTACTGTTTTCTCTGAATCGTGATTATGCCACAACATTAATTTTGGTCACTCATGACAGCCAGCTTGCGGCCCGTTGTC
AACGTTGCTTGCGGTTGGTTGATGGAAAATTGAGGGAAGAAAGATGA

Protein sequence : 
MVTGNILEVQHLSKHVGQGGHKITILQGVELVVESAQTIALVGESGSGKSTLLGIIAGLDDGSDGEVRLLGHNLSQMNEE
QRAQLRAESVGFVFQSFMLIPTLNALENVQLPALLRGESENSSRKQAVELLEQLGLGKRLKHMPAQLSGGEQQRVALARA
FSSQPKILFADEPTGNLDRQTGDRIADLLFSLNRDYATTLILVTHDSQLAARCQRCLRLVDGKLREER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA NP_931021.1 ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 1e-36 45
ybbA NP_931021.1 ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 5e-38 43
ybbA NP_931021.1 ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 1e-36 41