Gene Information

Name : sctJ (plu3785)
Accession : NP_930991.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : Type III secretion component protein SctJ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 4449008 - 4449745 bp
Length : 738 bp
Strand : +
Note : Similar to Yop proteins translocation protein J

DNA sequence : 
GTGAAGAAACACTATATAATCTGCGTTATGCTCGCTGTCCTGATGCTAACTGGCTGTAAAATCGAACTCTATACCGATGT
GAGCCAAAAAGAAGGCAACGAAATGTTAGCCTTGCTCAGGGAAGCGGGCATTTCCTCTGATAAGCAGCCAGACAAAGATG
GCAATATCAAGCTGTTAGTCGAAGAGTCTGATGTGGCACAAGCTGTTGAAGTGCTCAAACGTAAAGGATATCCACGGGAG
AACTTCTCTTCGTTACAAGATGTCTTCCCCAAGGACGGCCTTATCTCCTCACCAATAGAGGAGCGGGCACGGCTCAACTT
TGCCAAAGCACAGGAGATTGCCCGAACACTTTCCGAGATCGATGGCGTGCTCGTCGCCCGGGTACACGTTGTTTTACCCG
AGGAGCAAGACCGACTGGGCAAAAAGCTATCGCCAGCCTCTTCCTCGGTGTTTATTAAACACGCAGCGGACGTGCAACTC
GACACTTACATCCCTCAAATCAAGCAACTGGTTAATAACAGCATTGAAGGGTTGAGTTATGATCGGATCAGTGTCGTATT
AGTGCCCGCCGCGGGCGTGCGTCAGGTACCGTTGGCACCACGCTACTCCACTCTGTTCTCTATCCAAGTGACGGAAGAGT
CACAGGGACGGTTGATTGGGCTGTTGGTGCTATTATTAGCCCTGCTATTTATCAGCAATCTGGCACAATTCCTGTGGCAC
CGCAGCAGGATACAATAA

Protein sequence : 
MKKHYIICVMLAVLMLTGCKIELYTDVSQKEGNEMLALLREAGISSDKQPDKDGNIKLLVEESDVAQAVEVLKRKGYPRE
NFSSLQDVFPKDGLISSPIEERARLNFAKAQEIARTLSEIDGVLVARVHVVLPEEQDRLGKKLSPASSSVFIKHAADVQL
DTYIPQIKQLVNNSIEGLSYDRISVVLVPAAGVRQVPLAPRYSTLFSIQVTEESQGRLIGLLVLLLALLFISNLAQFLWH
RSRIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 5e-104 98
hrcJ AAB05080.1 HrcJ Virulence Hrp PAI Protein 2e-29 44
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 6e-37 41
hrcJ AAC35801.1 putative hrp type III secretion pathway protein Virulence Hrp PAI Protein 8e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctJ NP_930991.1 Type III secretion component protein SctJ VFG0218 Protein 1e-80 82
sctJ NP_930991.1 Type III secretion component protein SctJ VFG0409 Protein 1e-77 72
sctJ NP_930991.1 Type III secretion component protein SctJ VFG0051 Protein 2e-35 44