Gene Information

Name : sctH (plu3783)
Accession : NP_930989.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : Type III secretion component protein SctH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4448021 - 4448587 bp
Length : 567 bp
Strand : +
Note : Similar to Yop proteins translocation protein H

DNA sequence : 
ATGAATAGGATTGAAGGGCTATCCTATAACACCGTGTCGCAACCAACGGTACAGCCTTCGGTCAGTTCCAAGCACCAGCA
CAGCTTTGAGCAAGCACTGGAAACCACGCCCGATCAGCAAATGTTGAAAGAGCGCCAGCAACGCTGGCTTCAGGGAGAAC
CGCTGGAAAACGTTTTAGGCGACTTAGATCCAGCGACACAACGCAAAGTGATATGGCAGTGGTATCAGGCTTTATCGTCT
GATAAACAGCCCTCCCAACGTGCTCAGTTACAGGCCAAGCTGATTGCCCCGGTACAAGAGCGCTTATGGTCGCAGTTTGG
TGGCTTGGCAGGCAACATCAAACCACCACTGGATATGCCAGAACTTAGAAAGATTGTTCGTGAATTCGCCCCCACAGGTC
GACAACAGGAGACGGTTCTTCTTGAGGTACTCGGCGAAATTAAGCCTATTCCTGGCAATGAGTACCTGAGTGACCTTATC
CGACAAGAGTTAAAAACGCTGATCCCCCGTAACGGTATGGTGGATAACCTGATACGAAACTCACACAAACCCGATTTGGA
AGAATAA

Protein sequence : 
MNRIEGLSYNTVSQPTVQPSVSSKHQHSFEQALETTPDQQMLKERQQRWLQGEPLENVLGDLDPATQRKVIWQWYQALSS
DKQPSQRAQLQAKLIAPVQERLWSQFGGLAGNIKPPLDMPELRKIVREFAPTGRQQETVLLEVLGEIKPIPGNEYLSDLI
RQELKTLIPRNGMVDNLIRNSHKPDLEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscH AAO18029.1 LscH Virulence TTSS locus Protein 3e-67 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctH NP_930989.1 Type III secretion component protein SctH VFG0407 Protein 1e-18 41