Gene Information

Name : sctB (plu3777)
Accession : NP_930983.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : Type III secretion component protein SctB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4443688 - 4444110 bp
Length : 423 bp
Strand : +
Note : Similar to the Yop proteins translocation protein B

DNA sequence :

ATGCAAACTCTACTCAATCATTTGGCCAGTCGTTTAGGCCAGAAGCCTTTTGTTTCCGATAGACAAGGGCATTACCATTT
GCACATTGATAACTACAACCTGTTTTTTCGCCAACAGGGAACTGAACTTGTGTTATCCAGCCCGCTAAGCTGGCGCCATA
ACCCAAAAGATCCGTCAGGCGCTGAATTATTGAAAACACTATTGCAACAAGTTACGCGCTGGGGACGCCATGCTCCCCAT
GCATTGACCTTAGATGAATCAGAGAATCTTATTTTGGAAGCACGCCTTAACCTTGATAGTTTGGATGTTCAAATACTGGA
ACAGATGCTAACTCTGCACGTCGATCTACTGGAACAAGTCATGGCTTTATTGTCGGAAACCCAATCTGCCCCTCAATGGA
AACAGGCAATATGGCAACCATGA

Protein sequence :

MQTLLNHLASRLGQKPFVSDRQGHYHLHIDNYNLFFRQQGTELVLSSPLSWRHNPKDPSGAELLKTLLQQVTRWGRHAPH
ALTLDESENLILEARLNLDSLDVQILEQMLTLHVDLLEQVMALLSETQSAPQWKQAIWQP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
lscB	AAO18034.1	LscB	Virulence	TTSS locus	Protein	1e-58	96

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sctB	NP_930983.1	Type III secretion component protein SctB	VFG0210	Protein	4e-23	43