Gene Information

Name : sctU (plu3774)
Accession : NP_930980.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : Type III secretion component protein SctU
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4792
EC number : -
Position : 4439952 - 4441007 bp
Length : 1056 bp
Strand : +
Note : Highly similar to Yop proteins translocation protein U

DNA sequence : 
ATGAGCGGAGAAAAGACTGAAAAACCTACTCCCAAGAAACTTAGAGACGCCCGGAAGAAAGGCCAAGTAACCAAAAGTAA
CGAAGTTGTCTCCACCTCGTTAATCTTGGGGCTAATCGGCATGATAATGGTCATGTCTGAATACTATTTGGAGCATCTGA
GTAAACTGATGCTGATCCCGGCTAATCTGCTAGAGAAACCCTTTCCCCAAGCCTTCAACCATGTGGTTGAAAACTTGATG
CAAGAGCTGGTCTACCTCTGCCTGCCAATTCTAAGCGTTTCCGCTTTGCTATCGCTGGTATCACACTTTGCTCAATATGG
TTTTCTACTTAGTGGACACTCCATCAAACCTGATATTAAAAAGATCAACCCTGTTGAAGGTGCTAAGAGAATCTTCTCTA
TCAAGAGTCTGGTGGAATTCATCAAATCGATACTTAAAGTAGGACTGCTCTGCACCTTGGTTTGGATTACTCTGGCAGGC
AATCTACAAGCACTACTGCGGCTGCCGGAGTGTGGAACAAGATGTATTGTTCCTGTACTCGGCATAATGTTAACCCAGCT
CATGACCGTATGCGGCATCGGGCTTATCGTGATTTCTATTGCCGATTATGCTTTTGAACACTACCAACATATTAAACAGC
TTAGAATGAGTAAAGACGAGATCAAACGGGAGTATAAAGAGAGTGAAGGCAGCCCAGAGATCAAAAGCAAACGACGCCAA
TTTCACCAAGAATTACAATCAAGCAATATGCGCGCTAGCGTCAAGAATTCATCAGTTATCGTCGCCAACCCAACTCACAT
TGCGGTAGGTATCCGTTATAAGAAAGGAGAGACACCGTTACCCCTTATTACACTCAAGTTCACCAATGCGCAGGCCCTAC
AAGTTCGGCGTATTGCCGAAGAGGAAGGTATTCCGGTGTTACAACGCATTCCGCTGGCCCGAGCACTTTATCAAGATGGC
CTGATAGACCAATATATTCCTGCTGATCTCATCCAAGCTACCGCAGAAGTTTTGCGCTGGTTAGAACAGTGGCAAGATCG
CCCGCCGGAGCCGTAA

Protein sequence : 
MSGEKTEKPTPKKLRDARKKGQVTKSNEVVSTSLILGLIGMIMVMSEYYLEHLSKLMLIPANLLEKPFPQAFNHVVENLM
QELVYLCLPILSVSALLSLVSHFAQYGFLLSGHSIKPDIKKINPVEGAKRIFSIKSLVEFIKSILKVGLLCTLVWITLAG
NLQALLRLPECGTRCIVPVLGIMLTQLMTVCGIGLIVISIADYAFEHYQHIKQLRMSKDEIKREYKESEGSPEIKSKRRQ
FHQELQSSNMRASVKNSSVIVANPTHIAVGIRYKKGETPLPLITLKFTNAQALQVRRIAEEEGIPVLQRIPLARALYQDG
LIDQYIPADLIQATAEVLRWLEQWQDRPPEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 1e-156 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctU NP_930980.1 Type III secretion component protein SctU VFG0185 Protein 4e-101 71
sctU NP_930980.1 Type III secretion component protein SctU VFG0397 Protein 4e-113 71