Gene Information

Name : sctO (plu3768)
Accession : NP_930974.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : Type III secretion component protein SctO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4435719 - 4436180 bp
Length : 462 bp
Strand : +
Note : Similar to Yop proteins translocation protein O

DNA sequence :

ATGATTAGCCGTTTACAACGCATAAAAGCCTTGCGAGTCGAACGCGCTGAAAAACATTTTTCCTTGCAACAAATGAAGCT
GCAAACGGCCCGTCAACACCATCAGCAGGCTTTGCAAACCTTGCAAGATTACTGTCAATGGCGAATAGAAGAAGAACAAC
GGCTTTTTGCATTGTGTCAGGGCCAACCTATTGACCGCAAAGGTCTTGAACGCTGGCAACAACAAGTTGCCCTGTTACGC
GAAAATGAAGCGCAATTGGAAAAGCAAGTGGCTGAAATGACTGAAAAAGTGGAGCTGGAACTCCGCCAATTAAAAGAGTG
TCAACGTGTTCTGCACCACACACGCCAGCAGCAAGAAAAATTTAATGAATTGGGTCGTCAGCAACAAGAGGCGATCCGGG
CCCAAGGTGAATACCAGGAAGAGCTGGAACAAGAAGAGTTCCATCGCCAGGAAAGAGTGTAA

Protein sequence :

MISRLQRIKALRVERAEKHFSLQQMKLQTARQHHQQALQTLQDYCQWRIEEEQRLFALCQGQPIDRKGLERWQQQVALLR
ENEAQLEKQVAEMTEKVELELRQLKECQRVLHHTRQQQEKFNELGRQQQEAIRAQGEYQEELEQEEFHRQERV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
lscO	AAO18043.1	LscO	Virulence	TTSS locus	Protein	4e-53	95

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sctO	NP_930974.1	Type III secretion component protein SctO	VFG0391	Protein	8e-23	49