Gene Information

Name : sctW (plu3766)
Accession : NP_930972.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : Type III secretion control protein SctW
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4433095 - 4433967 bp
Length : 873 bp
Strand : -
Note : Similar to outer membrane, secretion control protein N, YopN (LcrE)

DNA sequence : 
ATGGATATTATCCAGAATCATCTTCATTCGATAACTTTATCAGAACTGGGTGCCGGGGTTACCGCACAACAGGAACAGGC
TAAGGTAGGTCAGTTTCAGGGAGAGAAAGTCGTGCTGGTATCAGCATCCCAGTCTTTTGCTGATGCGGCCGAAGAGATGA
CTTTTGCATTTTCGGAACGCAAGGATATGCCACTTTCCAAACGTAAAGTTAGCGATGGACATGCCAGGGTGCGAGAAATT
GAGGCACTGGTGGGTGAATATTTGCAGAAGGTGCCAGATTTAGAGCGCCAACAAAAAGTCAAGGCATTGATCTCTCACTT
AAATAGTGCTCAGTTGACTAATATTGCTCAACTACAGGCTTATCTGGAAAGTTTCTCTGGAGAGGTGAGTGAGCAATTTT
ATGCGCTAAGTCAGGCCCGTGATGCGCTGGCAGGCAGGCCAGAGGCACATGCCATATTGACATTGGTTGAACAAGAATTA
TCACGTTTAGCGCAAGAGCAGGGAATTGCTATCGAGTTGGGAGCCCGCATTACGCCTGATGCCACGGCAGCAGCTAGAAA
TGGGGTTGGCAACTTGCAAGCATTACGCAATATCTATCGTGATGCCGTGATGGATTATCAAGGGTTGTCGGCTGCCTGGC
GGGATATTCAATCCAATTTCAAGAGTAGTTCCCTGATGGAAGTAACAGGATTCATCATGAAAGCGTTGAGTGCTGATCTG
GACAGCCAACAGCGGCAACTTGATCCTATTAAGTTGGAACGTGTGATGAGTGACATGCATAAACTCCGTTTGCTTAACAG
TTTATCGGTTCAAGTTGAACAGTTATGGAAAAGCGTGGTAGAGGGGGAAAATCATGGCATACGGGCCTTCTGA

Protein sequence : 
MDIIQNHLHSITLSELGAGVTAQQEQAKVGQFQGEKVVLVSASQSFADAAEEMTFAFSERKDMPLSKRKVSDGHARVREI
EALVGEYLQKVPDLERQQKVKALISHLNSAQLTNIAQLQAYLESFSGEVSEQFYALSQARDALAGRPEAHAILTLVEQEL
SRLAQEQGIAIELGARITPDATAAARNGVGNLQALRNIYRDAVMDYQGLSAAWRDIQSNFKSSSLMEVTGFIMKALSADL
DSQQRQLDPIKLERVMSDMHKLRLLNSLSVQVEQLWKSVVEGENHGIRAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 8e-131 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctW NP_930972.1 Type III secretion control protein SctW VFG0193 Protein 2e-80 59
sctW NP_930972.1 Type III secretion control protein SctW VFG0389 Protein 2e-55 50