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Name : hofB (plu3639) Accession : NP_930847.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4286662 - 4288104 bp Length : 1443 bp Strand : + Note : - DNA sequence : ATGAACTCACTTTCAGCAACGGAAAATACATTAATGGAAAAAGAAATTCATGATATTTGTCAACGCCACCAATCTGTTGT GATAAAAAAAGATGATAATACGATAACAATTGCCAGCAGCGAATTACCCAATGATGATTTATTATCAGCATTACGCTTTA TTTCCGGATGTATTGTTAATGTAGAAATTTGGCCACTGGCAAGGATCGAATCAGTATTACATCAAAATATTTCACTGAGT CATGTACCAGAGGAAGAATCCTCTCTATTACCACTTAAAACTGATATCAATACAGATGAAAATGATGCCCCCGTCATTCA ACTTATTAATCAAACTTTATTAACTGCAATTCAACGGCGTGCATCCGATATTCATTTCGAGCCATTCCAACAAGGTTACC GTATCCGTATCCGAGTTGATGGCTCATTACACTTATTGTCTTCGCCATCTTATCAAATGAATGCAAGCATTGCCGCACGC CTTAAAATAATGGCGAAATTGAATATTGCTGAAAAACGGTTACCTCAAGATGGACAATTTGATTGGTTTGACACCCGACA CAACTATGCTATCCGTATGGCAACTTTGCCAACCATACACGGAGAAAAAGTTGTGCTTAGAATATTAAATACAATGCAGC AATTATCGTTAGATCAATTAGGTATTCCTGACCCATTATTAAATCAGCTCCGACAAAAACTCGCATTACCACAAGGAATG ATTTTAGTGACTGGCCCAACGGGTAGTGGGAAAACCGTAACTTTATATAGCTGCTTACAATATCTGAATCAGAATAAAAA GAATATTTGCAGTGTAGAAGATCCCGTCGAGATCCCACTGAATGGCATTAATCAGACACAAACTAATAGCAAAATCGAGC TCAATTTTGCCAAAGTATTACGGGCATTACTACGCCAAGATCCTGATGTCATTATGGTGGGAGAAATACGTGATGGCGAA ACAGCTGAAATTTCAGTAAAAGCGGCACAAACAGGTCATTTGGTTCTTTCTACATTGCATACTAATTCAACCATAGATAC ATTATCGCGCCTACAAAATCTGGGTATTTCAGGTTATATGGCTGCTTCTTGTATCAAATTAATTATCGCCCAACGACTTG TCAGAAAATTATGTCTTCATTGCCGTAAACAACAAACAGAAGAAACCGTTATTAATATTGAAAACAATTCTCTATTTATT AATCAATGGTTAGCAGTTGGTTGTGAACATTGTTTCTCCGGTTATTATGGCCGAACGGCTATTTATGAATTTTTAGAAAT AACTTATGATATTCAACAAATATTATCAGAACAGAATCCTAAAAATGTTCAAAACACCATTATGGCTCAAAGAAAAGACA CTTTACTTTCATCCGGTATTTTATTAGTGGAACAAGGCATCACGACATTAGAAGAAATTTATCAAGTCACAGGTCAGGAA TAG Protein sequence : MNSLSATENTLMEKEIHDICQRHQSVVIKKDDNTITIASSELPNDDLLSALRFISGCIVNVEIWPLARIESVLHQNISLS HVPEEESSLLPLKTDINTDENDAPVIQLINQTLLTAIQRRASDIHFEPFQQGYRIRIRVDGSLHLLSSPSYQMNASIAAR LKIMAKLNIAEKRLPQDGQFDWFDTRHNYAIRMATLPTIHGEKVVLRILNTMQQLSLDQLGIPDPLLNQLRQKLALPQGM ILVTGPTGSGKTVTLYSCLQYLNQNKKNICSVEDPVEIPLNGINQTQTNSKIELNFAKVLRALLRQDPDVIMVGEIRDGE TAEISVKAAQTGHLVLSTLHTNSTIDTLSRLQNLGISGYMAASCIKLIIAQRLVRKLCLHCRKQQTEETVINIENNSLFI NQWLAVGCEHCFSGYYGRTAIYEFLEITYDIQQILSEQNPKNVQNTIMAQRKDTLLSSGILLVEQGITTLEEIYQVTGQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-74 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-75 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | NP_930847.1 | hypothetical protein | VFG0112 | Protein | 9e-84 | 48 |
| hofB | NP_930847.1 | hypothetical protein | VFG2048 | Protein | 4e-75 | 45 |
| hofB | NP_930847.1 | hypothetical protein | VFG0233 | Protein | 7e-75 | 45 |
| hofB | NP_930847.1 | hypothetical protein | VFG1876 | Protein | 1e-75 | 44 |
| hofB | NP_930847.1 | hypothetical protein | VFG1880 | Protein | 7e-82 | 43 |
| hofB | NP_930847.1 | hypothetical protein | VFG0182 | Protein | 3e-71 | 43 |
| hofB | NP_930847.1 | hypothetical protein | VFG2426 | Protein | 6e-71 | 42 |
