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Name : pmt1 (plu0359) Accession : NP_927714.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 382431 - 385976 bp Length : 3546 bp Strand : - Note : Similar to macrophage toxin, IcmF-related protein. transmembrane protein. DNA sequence : ATGAACTGGCTTTCTCTGCTGCTCAACAATATCAAAAAACCGGCGAGGCCGCGTCTGCCGCCCCTGAAAGCCACCGCCTC GCTGATACTGGCCCTCCTGCCCTGTCTGGCCCTCATCTGGCTCTGGTGGTGGGGCCCCGGCTGGCAGTTTAAGCAGACGC ATCCGCTGGACACCCTGTCTGCCCGCTGGCTGGCGACGGTGATCATCCTCCTGCTGGCCCTGAGTTTTATCGGGATAAAA ATCTGGCGCCGCCTGCGCCAGCTTGAAAAACTTAAGCTGGAGGGGGAACTGAACACCGTCGATCCGGTGCGCGCCGATAT CACCCGTCAGGACCGTTATCTCCATCACTGGAAAGCGCAACTGCAACGCCATCTGGGGACCCGGGATTATCTCTACCAGC GCCCCTGGTACCTGGTGATGGGTAACACCGGCAGCGGCAAAACCGCCCTGATTCAGGCCGGCTGCCGGCTGACTGACATT GCCGCCCCGGACACCCTGAGCGGGGAAGAGGCGCTGCCCCTGCATCTGCGCTGCTGGCTGGGGGAGAAAGCCGTCATCAT TGACCCGGACGGGTTCCTTATCGACCAGATATCGCCGCCGGACACCGGCAAACCCCAGCTGCCCGCCCGCCTGTGGCAGG CGCTGCTCGTCTGGCTCACCGAAAACCGTCAGCGCCAGCCGCTCAACGGCATCATCCTGACGGTGGACATTCACCGCTTA CTGACCGACAACAAAGCGCAGCGGGAACGGGTTATTGCCGCGCTTCACCTGCGCCTGCAGGATCTGCGATTAACTCTGCA TCATCCTCTGCCTTTCTATCTGGTGCTGACCAAACTCGACCGGCTGCACGGTTTCAGCGCCGCTTTCCAGTCGCTGGACA GCGCGCAGCGCGCCCAGATCCTGGGCGTCACCTTTAGCCTGAATGCGCGGGATGAGCAGAGCTGGCGCACTGAGCTGGCC CAGTTCTGGCACCAGTGGATGCAGCAGCTCAACGCGGCCATGCCGGACATGATGCTCAACAAAGTCGATATCAGTCAGCG CAGTCCGCTGTTCAGCTTCACCCGCCAGATACAGGGGCTGCACAGCTATCTGGTGCCGCTGCTGGAGGGGCTCCTCGACA ACAGCGGCCCGGCACAGCCGGGCCTGCGGGGGGTTTATCTCACCTCGTCTCAACAAATCGGCCAGATGGATGACCTGTTT ACCCAGTCTGCCGCCGTGCAGTATCATCTGGGGCCGCAGGCTTTTCCCACCTGGCCGGTGGCGGACACCGTGCCCTACTT CACCCACGCGCTGTTTGAAGCGGTCCTGCTGGCCGAACCGAATCTGGCGGCTGAAAACCGCCGGTGGTTAAGCCGCCACC GCCACACACTGCTGACCTTCTCCGCCGTGGGTGCCGCCGTGGTGCTGGCCCTGTGGAGCGGCTGGCACTATTACTATCAG CAGAACTACCGGGCCGGTGACGAGGTCCTGGCGCAGGCCAACATCTTCCTGTCGGTGCCGCCGCCCACCGGCGAAGACCG TCTCGGCAATTTACAGCTTCCCCTGCTCAATCCGCTGCGTGAGGCCACGCTGGCCTACGGGGATTACCATCAGAAAGGGC TGCTGGCGGATATGGGGCTCTATCAGGGCGCAGCGGTCGGCCCGTATGTGGAAAACACCTACCTGCAACTGCTGTCTCAG CGCTTCCTGCCGGCCTTAATGAACGGCCTGCTGGATGACCTGAACCGGGCACCGAAAGGCAGCGAAGAAAAACTGGCCGT CCTGCGTATCATGCGGATGCTGGAAGATGGCAGCGGCCGCCATAAATCACTGGTCGAACACTATCTGCAGGCGCGCTGGA GTCAGGCGTTTAACGGCCAGCGCCCGTTGCAGGCGCAGTTACTGACGCATCTGGACTATGCGCTGGATCACACCGACTGG CGGGCCGCACGGGAGGCGGGCGATCAGGCCGCTATCAGCCGCTTTGCACCTTACCAACTGCCGCTCATCAATGCCGAGAA AGAACTGAGTCAGCTCTCGATTTATCAGCGGGTCTACCAGAACCTGCGCATTAAAGCCCAGGATTCACTGCCGCCGCCCC TCAACCTGCGCGACCAGATTGGCCCGGGCTTTGACCGCCTCTTTATGGCCAATAATGACAAGCAACTGATTATCCCGCAG TTCCTGACGATAAACGGCCTGAACAACTACTTCGTCAAACAGGACGACCAGCTGATCGACCTCACCGTCATGGACAGCTG GGTGCTGAACCTGTCACACAACGTGCAGTACAGCGACACGGACCGGCAGGAAATCCAGCGACAAATCACTGAGCAGTACC TGGGAGACTACACGGCCACCTGGCGCGCGGCCATGAACAACCTGGATATTCGTGATTTCACCGATATCCCGCAGGCCCTC AGCGCCCTTGAACAGGTCATCAGCGGCGAACAGCCCATCAGCCGGGCCCTGCAAATCCTGAGCGACAACACCCGTCTGCC GGAGATTAACGAGACGCTGCCGGCCAAAGCCCGGCAGCCGTTACGTGATACCCCGGATTACCGCCTGCGGGTGCGTATTC ACCGGGAATTCGCGCCGGAAACCGCGGTGCTGGAGGAGTCCGGGGACAAAAACAGCACCCTGCAGGGGGTTTATCAGCAA CTGGCGGCCCTGCACCGTTACCTGCTGGGCATTCAGAACGCGCCGGTCCCGGGGAAAGCCGCCCTGAATGCCGTTCAGCA GCGGCTTGAACAGCATAACGACGACCCGATTTTCGACGTACAGCAGCGGGCGAAAACCCTGCCGGCACCGCTCAACCGCT GGGTCGGCGCACTGGCGGAACAGGCCTGGCGGGTGGTGATGCGGGAAGCCATCCGTTCGCTGGAAATCGAATGGCACGAC ACCGTCGTCAGACAGTACCAGACCTACCTGGCCGGCCGCTATCCGTTTAACCCGGACGCGACGGAGGAGGTGCCGCTCAG TGAGTTCGGGCGGTTCTTCCGGCCCGGCGGCACGCTGGATGCCTTCTATCAGCAGAACCTGAAACCGTTTGTGGAAAACA ACCTGACCCACCGCGCGGACGGCCAGCAACTTATCCGCCCGGATGTGCTGGAACAGCTGAAACGGGCCGACCGTATCCGC GACACCTTCTTCTCGCCGCAAAACGGTCTGGGGGTCCAGTATGCCATTGAGCCCCTCAGCCTGACCGGCAATAAACGCCG CAGCCTGCTCAATCTCGACGGCCAGCTGCTCGATTACGCCCACGGCCGCAGCAGCATTGTGCACCTCATCTGGCCCAACG CGATGCGGGCCGGGGTGGAAAGCCAGCTCACGCTGATACCGGATGCCGGCGGCAAATCCCCGCGCGCCATCCGCTTCACC GGCCCGTGGGCCCAGCTGCGCCTGATTAACAGCGGCAAACTGACTAACGTACGTCAGGATTCGTTTGATGTGCGGTTCAC GGTGGACGGGGGCGACATGACCTACCGTCTCTACGTGGATGAATCCGACAACCCGTTTGCCGGCGGCCTGTTCAGTCAGT TCAGACTGCCTGACACCCTGTATTAA Protein sequence : MNWLSLLLNNIKKPARPRLPPLKATASLILALLPCLALIWLWWWGPGWQFKQTHPLDTLSARWLATVIILLLALSFIGIK IWRRLRQLEKLKLEGELNTVDPVRADITRQDRYLHHWKAQLQRHLGTRDYLYQRPWYLVMGNTGSGKTALIQAGCRLTDI AAPDTLSGEEALPLHLRCWLGEKAVIIDPDGFLIDQISPPDTGKPQLPARLWQALLVWLTENRQRQPLNGIILTVDIHRL LTDNKAQRERVIAALHLRLQDLRLTLHHPLPFYLVLTKLDRLHGFSAAFQSLDSAQRAQILGVTFSLNARDEQSWRTELA QFWHQWMQQLNAAMPDMMLNKVDISQRSPLFSFTRQIQGLHSYLVPLLEGLLDNSGPAQPGLRGVYLTSSQQIGQMDDLF TQSAAVQYHLGPQAFPTWPVADTVPYFTHALFEAVLLAEPNLAAENRRWLSRHRHTLLTFSAVGAAVVLALWSGWHYYYQ QNYRAGDEVLAQANIFLSVPPPTGEDRLGNLQLPLLNPLREATLAYGDYHQKGLLADMGLYQGAAVGPYVENTYLQLLSQ RFLPALMNGLLDDLNRAPKGSEEKLAVLRIMRMLEDGSGRHKSLVEHYLQARWSQAFNGQRPLQAQLLTHLDYALDHTDW RAAREAGDQAAISRFAPYQLPLINAEKELSQLSIYQRVYQNLRIKAQDSLPPPLNLRDQIGPGFDRLFMANNDKQLIIPQ FLTINGLNNYFVKQDDQLIDLTVMDSWVLNLSHNVQYSDTDRQEIQRQITEQYLGDYTATWRAAMNNLDIRDFTDIPQAL SALEQVISGEQPISRALQILSDNTRLPEINETLPAKARQPLRDTPDYRLRVRIHREFAPETAVLEESGDKNSTLQGVYQQ LAALHRYLLGIQNAPVPGKAALNAVQQRLEQHNDDPIFDVQQRAKTLPAPLNRWVGALAEQAWRVVMREAIRSLEIEWHD TVVRQYQTYLAGRYPFNPDATEEVPLSEFGRFFRPGGTLDAFYQQNLKPFVENNLTHRADGQQLIRPDVLEQLKRADRIR DTFFSPQNGLGVQYAIEPLSLTGNKRRSLLNLDGQLLDYAHGRSSIVHLIWPNAMRAGVESQLTLIPDAGGKSPRAIRFT GPWAQLRLINSGKLTNVRQDSFDVRFTVDGGDMTYRLYVDESDNPFAGGLFSQFRLPDTLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 92 |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 56 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 56 |
