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Name : xerD (plu3552) Accession : NP_930769.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4186762 - 4187673 bp Length : 912 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGTCAAAACAACCAACTCAGTTGACTAATCCACTGATAGAACAATTTCTTGATGCTATCTGGTTAGAACATGATCTTGC GGAAAATACGCTTGCTTCTTATCGGTTGGATTTGCAGGCATTGGATAACTGGTTGATACATCATGGTCATAATTTATTAT CTGTCCAGACGATAGATTTGCACTCTTTTCTGGCAGAACGCGTGGATGGAGGATATAAAGCCAGTAGTTCGGCGCGTTTA CTCAGTGCCATGCGCCAATTGTTTCTCTATTTTTATCGGGAAAAAATGCGGGAAGATGATCCGACAGCACTTTTGTCTGC ACCGAAATTACCAAAGCGATTGCCCAAAGATTTAAGTGAAAAGCAGGTAGAAGATCTACTCAATGCGCCCTGTACAGATC AGCCAGTGGAATTAAGGGATAAAGCCATGCTTGAAGTGCTTTATGCCTGTGGTTTGCGGGTATCTGAGTTAGTGGGATTG ACACTTTCCGATGTCAGTTTGCGTCAAGGCGTGGTGAGAGTGATTGGTAAAGGGAATAAAGAACGGCTAGTGCCTTTAGG GGAAGAAGCAATTTATTGGCTAGAGAATTATCTGGAATATGGGAGAGTTGGGCTGTTAAATGGTGCAACGTTGGATGTCC TTTTTCCTAGCAACCGAGGGCGACAAATGACCCGACAGACATTTTGGTATCGTATTAAACATTATGCGCTGTTGGCTGGA ATCGATACTGGACGGTTATCTCCTCATGTTTTACGTCATGCATTTGCCACGCATTTGCTAAATCATGGCGCTGATTTGCG AGTTGTGCAGATGTTATTGGGGCATAGTGATCTATCTACAACACAAATATATACTCATGTAGCAACAGAACGGCTCAAAT TGCTACATCAACAACATCATCCGCGAGGGTGA Protein sequence : MSKQPTQLTNPLIEQFLDAIWLEHDLAENTLASYRLDLQALDNWLIHHGHNLLSVQTIDLHSFLAERVDGGYKASSSARL LSAMRQLFLYFYREKMREDDPTALLSAPKLPKRLPKDLSEKQVEDLLNAPCTDQPVELRDKAMLEVLYACGLRVSELVGL TLSDVSLRQGVVRVIGKGNKERLVPLGEEAIYWLENYLEYGRVGLLNGATLDVLFPSNRGRQMTRQTFWYRIKHYALLAG IDTGRLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKLLHQQHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 7e-58 | 60 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 7e-58 | 60 |
