Gene Information

Name : pykF (plu2613)
Accession : NP_929848.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3056560 - 3057969 bp
Length : 1410 bp
Strand : +
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGAAAAAAACCAAAATTGTTTGTACTATCGGACCAAAAACAGAATCCGAAGAAAAACTGGCCGAACTGTTGAATGCCGG
CATGAATGTTATGCGCCTCAACTTTTCACACGGAGACTATGAAGAGCACGGCCAGCGTATTCAAAATATCCATTCAGTTA
TGACTAAGACAGGTAAACAAGCCGCTATTTTGCTGGATACTAAAGGCCCTGAAATTCGAACTATGAAGCTGGAAGGCGGT
AACGATGTCTCTCTAACCGCAGGTCAGACCTTCACTTTTACCACTGACACTTCCGTTATCGGTAATAAAGACCGTGTTGC
TGTCACTTACCGCGGTTTCCCCGCGGATCTGGCTCCCGGTAATACCGTGCTAGTTGATGACGGCTTGATCGGCATGACAG
TTAAAGAAGTCACTAAGTCAGAGGTTATTTGCCAAGTTTTGAATAACGGTGATTTGGGGGAAAATAAAGGTGTTAATCTG
CCGGGTATTTCCATCAGCCTGCCTGCCCTGGCTGAAAAAGATAAGCAAGATTTGATCTTTGGTTGCCAACAAGGTGTTGA
TTTCGTCGCCGCTTCTTTTATCCGCAAGCGCTCCGATGTTCTGGAAATCCGTGAACATCTGAAAGCGCACGGCGGTGAAA
ACATTCAAATCATCTCTAAGATTGAAAATCAGGAAGGTCTGAACAATTTTGATGAAATTCTGGAAGCTTCTGACGGGATC
ATGGTTGCTCGTGGTGATCTTGGCGTTGAAATTCCGGTTGAAGAAGTGATCTTCGCCCAGAAGATGATGATTCAAAAATG
TAATATCGCTCGCAAAGTTGTTATCACTGCAACTCAAATGCTCGATTCTATGATTAAAAACCCGCGCCCTACCCGTGCGG
AAGCCGGTGACGTCGCTAACGCTATTTTGGATGGTACTGATGCAGTTATGCTTTCTGGCGAAAGTGCAAAAGGCAAATAT
CCAATAGAAGCAGTGACTATCATGGCAACGATTTGTGAACGTACAGACCGCGTTATGCCAAGCCGTATCGAAGCCGTCCA
TTGCCGTAACCTGCGCGTGACCGAAGCGGTGTGTCGTGGTGCCGTTGAAACAGCAGAAAAACTGGAAGCCCCTCTGATTG
TGGTCGCAACCTATGGCGGTAAATCTGCCAAATCCATTCGTAAGTATTTCCCTGACGCGCCCATTCTGGCATTAACGACT
AATGAAGTGACTGCCCGCCAATTACTGCTTGTTAAGGGTGTTTTTACCCAAATTGTTAAAGAAATCGCCTCTACCGACGA
TTTCTACCGCATTGGTAAAGAAGCGGCGCTAGCAAGTGGCCTAGCGAAGAAAGGTGAAATCGTGGTTATGGTATCTGGTG
CCCTGGTTCCAAGCGGCACAACCAACACGTCGTCTGTTCACGTCCTTTAA

Protein sequence :
MKKTKIVCTIGPKTESEEKLAELLNAGMNVMRLNFSHGDYEEHGQRIQNIHSVMTKTGKQAAILLDTKGPEIRTMKLEGG
NDVSLTAGQTFTFTTDTSVIGNKDRVAVTYRGFPADLAPGNTVLVDDGLIGMTVKEVTKSEVICQVLNNGDLGENKGVNL
PGISISLPALAEKDKQDLIFGCQQGVDFVAASFIRKRSDVLEIREHLKAHGGENIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIQKCNIARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
PIEAVTIMATICERTDRVMPSRIEAVHCRNLRVTEAVCRGAVETAEKLEAPLIVVATYGGKSAKSIRKYFPDAPILALTT
NEVTARQLLLVKGVFTQIVKEIASTDDFYRIGKEAALASGLAKKGEIVVMVSGALVPSGTTNTSSVHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 86
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 85
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF NP_929848.1 pyruvate kinase VFG0479 Protein 0.0 86