Gene Information

Name : cat3 (plu2449)
Accession : NP_929686.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase (CATIII)
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : -
Position : 2876555 - 2877193 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTACTCAAAGGTTGATATAGATCTCTGGGATAGGAAAGAGCATTTCTTGCATTACCGTAATGTTGTGCAATGCGG
ATTTAGTCTAACAGCAAAAATTGATATTACCCATTTGTTATCTTCGTTGGTGGAAAAGCAATATAAATTCTATCCAACCA
TGATTTATTTAATATCTACAGTTGTAAACTCTTACTCTGAATTCAGAATGGCTATAAAAGATGAAGAATTAATTGTATGG
GATGGTGTAAATCCTGCATATACAATCTTTCATAAGGAAACCGAAACATTCTCAGCAATTTGGACTGAGTTCAATTCTGA
TCTGGCAGAGTTTATGAAAAATTATTCTGCTGATTATGAAACCTACAAAGATGATCTTTGCTTTTTTTCTAAACCAGAAC
TACCTGAAAACCACTTTCACATATCGTCAGTGCCGTGGGTAAGTTTTGATGGGTTTAACTTGAACATGGCGAGTGTTATG
GATTATTTTCCCCCCATATTTACCATGGGAAAATTTTACCAGAATGGAAATCAAACTCAGTTGCCTTTGGCAATTCAGGT
GCATCATGCTACTTGTGACGGCTTCCATGTGGGACGTGTTATTAATAACTTACAAGAGCTATGTAACGATTTTATTTAG

Protein sequence : 
MNYSKVDIDLWDRKEHFLHYRNVVQCGFSLTAKIDITHLLSSLVEKQYKFYPTMIYLISTVVNSYSEFRMAIKDEELIVW
DGVNPAYTIFHKETETFSAIWTEFNSDLAEFMKNYSADYETYKDDLCFFSKPELPENHFHISSVPWVSFDGFNLNMASVM
DYFPPIFTMGKFYQNGNQTQLPLAIQVHHATCDGFHVGRVINNLQELCNDFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catA2 ACF06176.1 chloramphenicol acetyltransferase II Not tested Tn5036-like Protein 3e-61 55
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 2e-54 48
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 1e-54 48
cat AAL08441.1 chloramphenicol acetyltransferase Not tested SRL Protein 9e-54 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) CP004022.1.gene799.p Protein 2e-58 53
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) NC_010410.6002590.p0 Protein 5e-55 48
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) NC_011586.7045194.p0 Protein 5e-55 48
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) NC_010558.1.6276004. Protein 5e-55 48
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) NC_010426.6155849.p0 Protein 4e-39 47
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) NC_010427.6155852.p0 Protein 4e-39 47
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) NC_010111.5787932.p0 Protein 2e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat3 NP_929686.1 chloramphenicol acetyltransferase (CATIII) VFG1032 Protein 4e-54 47