|
Name : plu0174 (plu0174) Accession : NP_927540.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 184635 - 185948 bp Length : 1314 bp Strand : + Note : Similar to dicarboxylate transport system (permease large protein) and to Unknown protein YiaN of Escherichia coli DNA sequence : ATGGATTGGCAAGTGGTTTTAGCGTTGTTCGGTAGTTTTGCCGTGTTGCTGGCACTGGGTGTACCGGTATCCTTTGCGAT TGGTTTGTCATCATTACTGGCAATTATGATGACTTTACCAATGGAAGCGGCGATTACCGTGGTTGCTCAACGTATGGCAG TCGGTGTTGATAACTTCTCTTTGCTCGCTATCCCGTTCTTTATTCTGGCGGGAAATATTATGAATCAAGGGGGAATCGCT GCCCGTCTAATTAATCTGGCGAAAGTCATGGGCGGCCGTTTGCCCGGTTCTCTGGTGCACGTCAATATTATAGCGAATAT GTTTTTCGGTGCGATTTCGGGCTCAGCAGTGGCATCGGCTGCGGCGGTCGGCGGAACGATGGCACCAATGCAGAAAAAAG AGGGTTATGAGCCGGAATACTCCGCTGCTGTAAACATTGCTTCCTGTCCTGCCGGTTTGTTGATCCCGCCAAGTAATACT TTGATTGTTTACTCACTGGTTTCTGGTGGCACATCAATTGCCGCACTGTTTTTGGCGGGTTATATTCCCGGTATTTTGAT GGGGGCATCTTTGATGATTGTGGCGGCAATCATTGCCAAGCGCCGTGGTTATCCGGTATCACCCAAGCCGACATGGAACG AATTTTTCACCACATTAGTTCGTGCATTGCCTTCTCTGATGCTGGTTGTGGTTATTATGGGAGGGATCATTGCCGGTATT TTTACCGCCACAGAAGCCTCGGCGATTGCTGTGTTGTACAGCTTTATATTGGCAGTATTGATTTATCGTGAAGTCAGTAT CACTAAATTACCCAAAATCATTCTGGATTCTGCGGTGACCACTTCCATTGTTTTGTTGCTGATTGGTGCATCAATGGGCA TGTCTTGGGCAATGGCGAATGCGGATCTGCCCTATTTGATCGCTGATGCACTCATGGCGTTTTCTGAAAACCCTCTGGTT ATTCTGCTGGTCATTAATCTGGTTCTGTTGTTGGTCGGAACCTTTATGGATATGACACCGGCGATTCTGATTTTTACGCC GATTTTCCTGCCAGTAGCGCAGAATATGGGCGTTGATCCGGTACATTTCGGCATCATTATGACCTTCAACCTAGCTATTG GTATTTGTACACCGCCGGTAGGGAGTGCGCTGTTTGTGGGTTGTTCTATCGGTGAGGTCAGCATTAATAAGGTATTGAAA CCGTTAGTTCCCATGTATTGCGCTTTGGTTATCGCGTTGATGTTGGTGACCTTCATACCGCAACTGAGCTTGTGGTTGCC TCAGATGTTACTGAATTACTCAGTATTTAAGTAA Protein sequence : MDWQVVLALFGSFAVLLALGVPVSFAIGLSSLLAIMMTLPMEAAITVVAQRMAVGVDNFSLLAIPFFILAGNIMNQGGIA ARLINLAKVMGGRLPGSLVHVNIIANMFFGAISGSAVASAAAVGGTMAPMQKKEGYEPEYSAAVNIASCPAGLLIPPSNT LIVYSLVSGGTSIAALFLAGYIPGILMGASLMIVAAIIAKRRGYPVSPKPTWNEFFTTLVRALPSLMLVVVIMGGIIAGI FTATEASAIAVLYSFILAVLIYREVSITKLPKIILDSAVTTSIVLLLIGASMGMSWAMANADLPYLIADALMAFSENPLV ILLVINLVLLLVGTFMDMTPAILIFTPIFLPVAQNMGVDPVHFGIIMTFNLAIGICTPPVGSALFVGCSIGEVSINKVLK PLVPMYCALVIALMLVTFIPQLSLWLPQMLLNYSVFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-56 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-56 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| plu0174 | NP_927540.1 | hypothetical protein | VFG1110 | Protein | 8e-57 | 41 |
