Gene Information

Name : plu0125 (plu0125)
Accession : NP_927495.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 132320 - 133534 bp
Length : 1215 bp
Strand : +
Note : Highly similar to Sai integrase

DNA sequence :
ATGAAGCTAACAGTCAGACAAATCGACACAGCCAAGCCCAAAGAGAAGCCGTACAAACTATCTGATGGTGGAGGCCTCTA
CCTTGAAGTAACCACCAACGGCTCACGCTACTGGCGTTTAAAGTATCGTTATGCGGGTAAAGAAAAGTGCCTTGCTTTCG
GCGTTTATCCTGAGGTTTCTCTCGCTCAAGCCCGTGAAAAGCGTGAAGCTGCGAAAAAGTTACTATCTGCTGGAAGCGAT
CTCGGAGAGCTAAAGAAAGCAGAGAAAATTGCTCAAAAACTCAACTATGATAATACCTTCGAAGCTATTGCCCGTGAATG
GCATCAGCTGAGAGCGGATCGTTGGTCATTACGTTATCGTGATGAAATTATTGATACCTTTGAAAAGGATATTTTCCCCT
ACATCGGTAAGCGTCCCATAGCTGAAATTAAGCCCATGGAATTGCTGGAAACCCTTCGTCGTATGGAAAAGCGTGGTGCA
TTAGAAAAGATGCGCAAAGTCAGACGGCGCTGCGGTGAAGTATTCCGTCATGCAATCGTGACCGGACGCGCTGAATACAA
TCCTGCACCCGATCTCGCTACAGCCCTCGCAACACCAAAGAAAACGCATTTTCCTTTCCTGACTGCTGAAGAACTCCCTC
ACTTTCTTAAAGATCTGGCCGGTTATACTGGAAGCGTTATTACCAAGACTGCAACACAAATCATCATGCTTACAGGGGTA
CGAACTCAGGAATTACGTTTTGCCCGCTGGGAGGATATCAATTTTGAAAAGCGGCTCTGGGAGATCCCTGCTGAAGTGAT
GAAGATGAAACGACCACACATCGTTCCGATGTCGGATCAGGTTGTCGAGCTCTTTGAGTCACTTAAGCCTATTACTGGGC
TATACCCGCTGGTATTCGTCGGACGCAATGATCGAACGAAGCCGATCTCAAAGGAAAGCGTTAATCAGGTGATTGAGTTG
TTGGGGTATAAAGGAAGGCTGACGGGGCATGGTTTCCGCCACACGATGAGTACCATTCTTCATGAAGAAGGCTTTAACTC
CGCGTGGATAGAAACGCAGCTAGCGCATGTGGATAAGAACGCGATACGTGGGACTTACAACCATGCCCAGTATTTGGAGG
GGCGTAGGGAGATGATGCAGTGGTATAGTGATTACATAGTTAGCTTGCCTGAAGATAATACATCACTGGTGTTTTATTCA
AAAAAAGTAGTATGA

Protein sequence :
MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKCLAFGVYPEVSLAQAREKREAAKKLLSAGSD
LGELKKAEKIAQKLNYDNTFEAIAREWHQLRADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGA
LEKMRKVRRRCGEVFRHAIVTGRAEYNPAPDLATALATPKKTHFPFLTAEELPHFLKDLAGYTGSVITKTATQIIMLTGV
RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFESLKPITGLYPLVFVGRNDRTKPISKESVNQVIEL
LGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKNAIRGTYNHAQYLEGRREMMQWYSDYIVSLPEDNTSLVFYS
KKVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 2e-148 82
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 3e-148 82
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 3e-148 82
int AAD44730.1 Int Not tested SHI-2 Protein 2e-148 81
int CAC39282.1 integrase Not tested LPA Protein 6e-149 81
aec33 AAW51716.1 Int Not tested AGI-3 Protein 4e-149 81
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 5e-148 81
ECs4534 NP_312561.1 integrase Not tested LEE Protein 5e-148 81
int AAC31482.1 CP4-like integrase Not tested LEE Protein 4e-148 81
int ACU09430.1 integrase Not tested LEE Protein 4e-148 81
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-112 62
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 4e-114 61
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 1e-65 43
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 3e-65 42
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 3e-65 42
int AAK16198.1 Int Not tested PAI-I AL862 Protein 1e-65 41
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 1e-65 41
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 8e-66 41
int AAL51028.1 CP4-like integrase Not tested LEE Protein 8e-66 41
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 5e-65 41
int-phe AAL60261.1 Int-phe Not tested LEE Protein 8e-66 41
int AAL51003.1 CP4-like integrase Not tested LEE Protein 9e-65 41
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 1e-65 41
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 7e-65 41
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 1e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
plu0125 NP_927495.1 hypothetical protein VFG0598 Protein 1e-148 82
plu0125 NP_927495.1 hypothetical protein VFG0783 Protein 2e-148 81