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Name : clpB (plu1270) Accession : NP_928581.1 Strain : Photorhabdus luminescens TTO1 Genome accession: NC_005126 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1469770 - 1472343 bp Length : 2574 bp Strand : + Note : - DNA sequence : ATGCGTCTGGATCGTCTTACTAATAAATTCCAGCTTGCTCTCGCTGACGCCCAGTCCTTTGCACTTGGGCATGATAATCA GTTCATCGAACCAATTCACTTAATGAGTTCACTGTTAAAACAAGAGGGTGGCTCTATTCGCCCATTATTAACGTCAATTG GAATCGATGCGGGCCGTTTCAGCAATCAGCTTGAGCTGGCTTTAGAACGCTTGCCGCGGGTACAGGGTATTGGTGGTGAT GTACAACCATCCAATGACTTAGTTCGTCATTTAAATCTGTGTGACAAACTGGCACAAAAAGCCGGGGATAATTTTATCTC CTCTGAATTATTTGTTCTGGCAGCATTGGAAGAACGTGGCACATTAAGTGACATATTGAAAGCTGTTGGCGCAACAAAAG AAAAAATCACTAAGGCAATAGAACAAATGCGTGGTGGTGAAAAAGTTGATGATCAGGGAGCGGAAGATCAACGCCAAGCC CTGAAAAAATACACTATTGATCTCACTGAACGTGCTGAACAAGGCAAACTTGATCCGGTGATTGGCCGTGATGAAGAAAT TCGCCGCACCATTCAGGTATTACAACGCCGTACCAAAAATAACCCGGTTTTAATTGGTGAACCCGGGGTTGGTAAAACTG CCATTGTGGAAGGGCTTGCTCAACGAATCATTAATGGTGAAGTTCCTGAGGGGTTGAAAAATAAGCGAGTCCTTTCCTTG GATATGGGCGCGCTGTTAGCAGGGGCTAAATATCGTGGTGAATTCGAAGAGCGTTTGAAAGGTGTGTTGAATGACCTTGC TAAACAGGAAGGCAATGTCATTCTGTTTATTGACGAATTGCATACTATGGTTGGTGCCGGTAAGGCTGATGGGGCAATGG ATGCTGGTAACATGTTAAAACCCGCCTTGGCCCGTGGTGAACTTCACTGTGTTGGTGCAACAACACTGGATGAATATCGT CAATATATTGAAAAAGATGCAGCGCTGGAACGCCGTTTCCAAAAAGTCTATGTTGCAGAACCTTCCGTAGAGGACACTAT CGCTATTTTGCGCGGTCTGAAAGAGCGTTATGAGTTACATCATCATGTACAAATTACCGACCCTGCAATTGTCGCGGCAG CAACATTATCTCATCGTTATATCTCGGACCGTATGTTGCCGGATAAAGCTATCGACTTGATCGATGAAGCGGGTGCCAGT TTACGTATGCAAATGGATTCAAAACCGGAAGCGCTGGACCGTTTGGAACGCCGGGTTATCCAATTGAAGTTGGAACAGCA GGCGCTGAAAAAAGAGTCTGATGATGCCAGTAAAAAACGGCTTGAAATGCTTAATGAAGAGCTGCTCGTAAAAGAACGCG AATACTCTGAACTAGAAGAAGAGTGGAAAGCTGAAAAAGCAGCACTTACGGGTACTCAGCACATAAAAGCGGAATTGGAA AATGCCCGTATCAGTTTAGAACAGGCACGCCGCAGTGGTGATTTAGCGAAGATGTCTGAAATTCAGTATGGAAAAATACC TGGATTGGAAAAACAACTTGCCGCAGCCACACAAGCTGAAAGTAAGCATATGAAACTGCTTCGTAACAAAGTTACCGATG CGGAAATTGCAGACATTCTTGCTCGTTGGACGGGTATTCCTGTTGCCAGAATGCTTGAGAGTGAAAAAGATAAACTGTTG CGCATGGAGCAAGAGCTGCATAAACGTGTCATTGGTCAGGATGAGGCAGTCAATGCAATATCTAATGCGATTCGCCGTAG CCGTGCTGGATTGGCTGATCCAAACCGGCCGATTGGCTCATTCCTGTTCCTTGGTCCAACCGGTGTTGGTAAAACTGAGT TGTGTAAGGCGTTAGCGAATTTCCTGTTTGACAGCGATGATGCAATGGTGCGTATCGATATGTCTGAATTTATGGAAAAA CATGCCGTATCACGGTTGGTAGGAGCACCGCCGGGATATGTTGGTTATGAAGAAGGTGGTTATCTAACAGAAGCGGTTCG TCGTCGACCTTATTCCGTTATTTTGCTTGATGAAGTGGAAAAAGCGCACTCGGATGTATTCAATATCTTATTACAGGTGC TGGATGATGGTCGATTGACTGATGGGCAAGGTCGTACTGTCGATTTCCGTAACACGGTTGTCATCATGACTTCTAATCTC GGGTCGGACATGATCCAAGAGCGTTTTGGTAGTCTAAATTATGATGAAATGAAAGATATAGTGATGGGAATTGTTAGCCA TAATTTCAGACCTGAATTTATTAACCGTATTGATGAAGCTGTTGTATTCCATCCATTAGGGCGTCGGCATTTGTCAGCGA TTGCAGATATCCAATTGCAACGTTTATACAAGCGACTGGAAGAACGTGGTTATCAGGTTACGATTACTCAGCAAGCGTTG GAAATATTGGCAGAAGCCGGGTTCGATCCTGTTTACGGAGCACGGCCATTGAAGCGAGCTATCCAGCAGGAAATCGAAAA CCCACTAGCTCAAAAGATACTTTCCGGCCAACTATTGCCAGGAAAACCAGTTACTCTGGATGTGGAAAATAGCCATATCG TAGCAAAGCAATAA Protein sequence : MRLDRLTNKFQLALADAQSFALGHDNQFIEPIHLMSSLLKQEGGSIRPLLTSIGIDAGRFSNQLELALERLPRVQGIGGD VQPSNDLVRHLNLCDKLAQKAGDNFISSELFVLAALEERGTLSDILKAVGATKEKITKAIEQMRGGEKVDDQGAEDQRQA LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSL DMGALLAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS LRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNEELLVKEREYSELEEEWKAEKAALTGTQHIKAELE NARISLEQARRSGDLAKMSEIQYGKIPGLEKQLAAATQAESKHMKLLRNKVTDAEIADILARWTGIPVARMLESEKDKLL RMEQELHKRVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEK HAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDMIQERFGSLNYDEMKDIVMGIVSHNFRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQAL EILAEAGFDPVYGARPLKRAIQQEIENPLAQKILSGQLLPGKPVTLDVENSHIVAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-160 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_928581.1 | protein disaggregation chaperone | VFG2084 | Protein | 3e-101 | 41 |
