Gene Information

Name : IS_Pl3_3 (plu1061)
Accession : NP_928390.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1239230 - 1240735 bp
Length : 1506 bp
Strand : +
Note : Similar to hypothetical proteins encoded in ISEc8

DNA sequence :
ATGACGCTCAATGACTTAATCGCGCTGGATGACCCCGGCCAGTTCCGCCTGCGGGCACTGGCGCTGCTTCAGCAACAAGG
TGATTATATTCGCCAGCTGGAAGAGGCCCTGAAACAGGCGCAACGCTGGCGTTTTGGCGCGCACAGCGAAACCCTGCCTG
CCGGTCCCAAACGCAGTCAGTTTGAGGAAGATGCCGATACCGATATCGCGGTGCTGGAAACCCGGCTGTCACGCCTGCAT
ATCAAGGAAAACGCGACCCCGGCCCAGCCTAAACGTCAGCCTTTGCCGGCGACTTTACCCCGTGAAGATATCCGGCTGGC
GCCGGAGACGGAGAGCTGCCCGGATTGCGGTCATGCCCTGCGCTTTTTGCGTGATGAAATCAGTGAGCGACTGGAATACC
GTCCGGCCACGTTTATCGTCCGGCGCTATATCAGCCCGCAGTACAGCTGCGCGCGCTGTCAGTGTGTGCATGCTAAAGCC
CAGCCCGCCCATCTTATTGAAAAGGGCCTTCCAGAGCCGGGGTTGCTGGCTCAGGTGGTGGTCGCTAAATATCGTGACCA
CCTGCCGCTCTACCGTCAGCAGCAAATCTATGCCCGCAGCGGTGTCACCCTGGCCCGCAGCACCCTGTCGGACTGGGTGG
GGCAGGTGGCGGTGGCGTTGCAACCGTTAGCCGATGCCCTGAAGCAGACGCTGCTGACGTCCCCGGTGCTGCATGCCGAT
GAGACCCCGTTGCCGATACTGGCCCCGGGAAAAGGCCAGACCCAGCGAGCTTACCTGTGGACGTCTGTCACCGGCCCCGA
TACCTCGCCGGCAGTGGTATACTATGAGCTGCATCCCGGCCGCAGCGGCCGTTATGCCCAGAGCCTGCTGAAAGACTGGT
CGGGCGGCACGTTGGTGACGGATGACTATGCCGGTTACAACGCACTGCATGCCCGGGCGGATATCACCGAAGCGGGTTGC
TGGGCTCACGCCCGCCGCAAATTCTTTGACCAATACAAAGCGAGCCAAAGTCCGGTGGCGAAACAGGCGCTGGATGGCAT
TCGTGACCTGTACAAGCTGGAGCGAAAAATCAAACACCGGCCGCCGGATAAACGGCGTCAGTGGCGGCAGCGTTATGCCC
GGCCGTGGCTGAATGAGTTCCGGTCCTGGTTGCAAACGATGCAGACCCAAACGGCCCCCAACTCGGGGTTACGCAAAGCG
ATAGATTACACGCTGAAGCGCTGGTCGGCGCTGGTGTGTTATCTGGATGACGGGGGGGTGCCGATAGACAACAACCGGGC
GGAGAATGCGGTCCGGGGTGTGGCGCTCGGCCGAAAGAACTGGCTTTTTGCGGGTTCACTGGCCGCGGGGCAACGGGCGG
CCATGATAATGAGCCTGCTGGAAACGGCCAAAGCCAACGGACATGAGCCCTGGGTCTGGTTACGTGATGTCCTCAGCCGG
CTGCCTGTCTGGCCGAACAATCGGTTGAATGAGCTGTTGCCCTGGCCTGAGAATCCCTTCCGTTAA

Protein sequence :
MTLNDLIALDDPGQFRLRALALLQQQGDYIRQLEEALKQAQRWRFGAHSETLPAGPKRSQFEEDADTDIAVLETRLSRLH
IKENATPAQPKRQPLPATLPREDIRLAPETESCPDCGHALRFLRDEISERLEYRPATFIVRRYISPQYSCARCQCVHAKA
QPAHLIEKGLPEPGLLAQVVVAKYRDHLPLYRQQQIYARSGVTLARSTLSDWVGQVAVALQPLADALKQTLLTSPVLHAD
ETPLPILAPGKGQTQRAYLWTSVTGPDTSPAVVYYELHPGRSGRYAQSLLKDWSGGTLVTDDYAGYNALHARADITEAGC
WAHARRKFFDQYKASQSPVAKQALDGIRDLYKLERKIKHRPPDKRRQWRQRYARPWLNEFRSWLQTMQTQTAPNSGLRKA
IDYTLKRWSALVCYLDDGGVPIDNNRAENAVRGVALGRKNWLFAGSLAAGQRAAMIMSLLETAKANGHEPWVWLRDVLSR
LPVWPNNRLNELLPWPENPFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 4e-93 48
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-63 44
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 2e-88 43
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-58 41
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-76 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
IS_Pl3_3 NP_928390.1 hypothetical protein VFG1700 Protein 1e-63 44
IS_Pl3_3 NP_928390.1 hypothetical protein VFG1513 Protein 3e-58 41