Gene Information

Name : plu1024 (plu1024)
Accession : NP_928353.1
Strain : Photorhabdus luminescens TTO1
Genome accession: NC_005126
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1204387 - 1205214 bp
Length : 828 bp
Strand : +
Note : Similar to transposase, IS3 ssgr IS3 family

DNA sequence : 
GTGGCTTTCCTTTGCCAACTGTTCGGGGTTTATCGTAGCAGCTATCAGGCCTGGCACCATCGAGTGAAAAAGCCCGATAC
TGAGCGCATCAGGTTAAAAAGTTTAGTCCGGGAAGCGTTTAATGAGGGCAAGGGCTCAGCTGGCGCACGAACGATTGCCG
CCATGGTGACCGCCAAAGGCATACCATTAGGCCGATGGCGGGCAGGAAAATTAATGGCTGAACTGGGGCTGGTCAGTCGT
CAGCAGCCAAAACACCGCTATTCACATCAGGAACAAGAACATCTTGATATTCCTAACGATCTTGACCGTCAGTTCACGGT
CACCGAGCCCAATCAAGTTTGGTGTGGTGATGTGACCTATATCTGGACAGGTAAATGTTGGGCCTATCTGGCCGTCGTGC
TTGACCTGTTTGCTCGTAAGCCCATTGGTTGGGCGATGTCTTTCTCTGCCGACTCTGAGTTGACAAAGAGAGCGTTGGAA
ATGGCGTTTGAATCAAGGAGGAAGCCACAAGGTGTCATGTTTCACCGTGATCAAGGTAGCCACTATACCCGCAAAGCGTT
CAGACGGTTATTGTGGCGTTATGGTATCAAACAAAGCCTGAGCCGCCGAGGTAATTGCTGGGATAATAGCCCAATGGAGC
GCTTTTTCAGGAGCTTAAAAAGTGAATGGGTTCCTGAAGAAGGATATTCAGATTTTAGAAAAGCCTTTCGCTCAATCACG
AATTATATACAGGGGGAACCCCGTCAATCACGAGATTTCCCTTATGTCTTTATTACGTTTTTATATCCGGCATCAATTCG
CAGAGCGAATGGGGCTGGCGCTGGATGA

Protein sequence : 
MAFLCQLFGVYRSSYQAWHHRVKKPDTERIRLKSLVREAFNEGKGSAGARTIAAMVTAKGIPLGRWRAGKLMAELGLVSR
QQPKHRYSHQEQEHLDIPNDLDRQFTVTEPNQVWCGDVTYIWTGKCWAYLAVVLDLFARKPIGWAMSFSADSELTKRALE
MAFESRRKPQGVMFHRDQGSHYTRKAFRRLLWRYGIKQSLSRRGNCWDNSPMERFFRSLKSEWVPEEGYSDFRKAFRSIT
NYIQGEPRQSRDFPYVFITFLYPASIRRANGAGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-76 64
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-76 64
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-76 64
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-76 64
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-76 64
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-76 64
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 8e-76 64
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 8e-76 64
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-58 58
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 5e-57 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
plu1024 NP_928353.1 hypothetical protein VFG1122 Protein 4e-76 64