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Name : serS (gvip075) Accession : NP_923662.1 Strain : Gloeobacter violaceus PCC 7421 Genome accession: NC_005125 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 758606 - 759895 bp Length : 1290 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGCTCGACCCCAAACTGTTGCGCGACGATCCCGCCAAGCTCATCGAACGGCTCAACACCCGCGGCGGCGACTTTACCGA AGTGATTGAACAACTGGTGGCCCTGGATTCCCAGCGGCGGGCCAGCCAGACCGCATTCAACCGCGCCCAGGCCGAGGGCA ACCAGATTGGCAAGCAGGTGGGCGAACGGCTGCGCCGGGGTACTGCCGTCGGCGACCCCGAGGTGCTCGCCCTCAAGCAG CGGGGAATCGATCTCAAAGCCACCCTCGCCCTACTGCAGGATCAAGAGCGCGAGCTTGCCGAGCGCTTCGCGGCACTGTT GCCGACTTTGCCCAACGTGCCCCGCCCCGAGGTACCGATCGGCAAAGACGAAAACGACAACCGCGAGATGCGCTTCTGGG GCACCCCCCCTATCTTCGATTTTGAGCCGGCGGCCCACTGGGATCTGGGCGAACGGTTGGGACTGATGAATTTCGCGCGG GCAACCCTGGTGGCCCAGGCCCGCTTTGTGACCCTGATGGGCGACGGGGCGCTGCTGGAGCGCGCTTTGATCGCTTTTAT GCTCGATCGCCACCGCGCCCACGGCTATATCGAAATTCTGCCTCCATACCTGGTCAACACCGCTTCGATGACTGGGACCG GACAGTTGCCCAAATTTGCCGAGGACAGCTTCCGCTGCCGGGACGACGATCTGTGGCTGATTCCAACGGCGGAGGTGCCG GTCACCAACCTCTACCGAGACGAAATCCTGACAGACATGCAGTTGCCCATTCACCACTGCGCCTTTACCCCCTGCTTCCG GCGCGAGGCGGGCAGCTACGGCCGCGACACCCGGGGACTTATTCGCCTGCATCAGTTTCACAAAGTCGAACTGGTCAAAT TCTGCCGCCCGGAGCATTCGCCCACCGAGCACGAAAAACTGGTGGCCGACGCCGAGGATGTGCTGCAGCAACTGGAACTG CCCTACCGGGTCATCGAGCTGTGTACCGGGGATCTGGGCTTTGGCGCCGCCCGTTGCTTCGATCTGGAGGTGTGGCTACC CAGCCAGAACCGCTACCGCGAAATTTCCTCCTGCTCGAACTTCGAAGATTTTCAGGCCCGCCGCGCCAATCTGCGCTTCA AAGCGCCCGACAAAAAAGGCACCGAGTTCGTCCACACCCTCAACGGCTCGGGATTGGCCGTCGGGCGTACCTTCGCCGCC ATTCTCGAAAATTACCAGAACCGCGACGGCACAGTGCGCGTGCCCGAAGCCCTGAAACCTTACGTGCGCAGGGACGTGCT CAGCCGGTAA Protein sequence : MLDPKLLRDDPAKLIERLNTRGGDFTEVIEQLVALDSQRRASQTAFNRAQAEGNQIGKQVGERLRRGTAVGDPEVLALKQ RGIDLKATLALLQDQERELAERFAALLPTLPNVPRPEVPIGKDENDNREMRFWGTPPIFDFEPAAHWDLGERLGLMNFAR ATLVAQARFVTLMGDGALLERALIAFMLDRHRAHGYIEILPPYLVNTASMTGTGQLPKFAEDSFRCRDDDLWLIPTAEVP VTNLYRDEILTDMQLPIHHCAFTPCFRREAGSYGRDTRGLIRLHQFHKVELVKFCRPEHSPTEHEKLVADAEDVLQQLEL PYRVIELCTGDLGFGAARCFDLEVWLPSQNRYREISSCSNFEDFQARRANLRFKAPDKKGTEFVHTLNGSGLAVGRTFAA ILENYQNRDGTVRVPEALKPYVRRDVLSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-102 | 53 |
