Gene Information

Name : glr3313 (glr3313)
Accession : NP_926259.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 3512214 - 3513116 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence :
GTGGAAATGGGCTGGCTCGAATGGCTTGCCGAGCCGCTGCGCTACCCGTTCATGCAGCGGGCACTTCTCTCGGCCTTGCT
GGTGGGTACCATCTGCGCCATCACCGGCAGCTATCTCATCGTGCGGCGCTTGGCGCTGTTGGGGGATGCGGTGAGCCGGG
CGGTGATGCCGGGGCTTGCCATCGCCTTTATCGTGGGCGGCAACATCTTCGTGGGGGCGTTCATCGCCGGGGTGCTCTCC
ACCGCCCTGATTGGTTACATTCATACCCACTCGAAGATCAAAGAGGACACGGCGATGGGCCTGGTCTTCTCGGGCTTTTT
TGCCACCGGCATCATCTTGATCACCAAGATCCAGAGCGAGACAAAAGTCGACTTGATGCACTTTCTGTTCGGCAACATCC
TGGGGGTGAGCGAGTCGGACCTGCTCGCCACGGCCGTCATCTCCGCCGCCGTGGTGGCGACCATCCTGCTGTTATTTAAA
GAACTGCTCTTCCACAGCTTCGACCCGCTCGGGGCGAAGGCGGCGGGACTGCCGACCGAGGTGTTGCACCTGGTGTTGAT
GAGCCTGATTGCCCTCACCATCGTCGCCTCGATGCAGTCGGTGGGGGTGGTGCTGGTGATCGCTTTGATGATCGCCCCCG
GCGCTACGGCCTATCTGCTCACCCGCCGCCTGCCCTCGATGATGGGCCTCGCGGTGCTTTTGGGGGCCATTGCAAGCCTG
GTGGGGTTGTACTTGAGCTATTACCTGGATATCGCCTCCGGTCCGGCGGTGGTCGTGGTCTCGATCGCTTGCTTTGTCCT
GGCGTTTTTGTTCAGTCCCCGCCAGGGCCTCCTCACCCGTCTCTGGCAGGACCGCAAAGCCGACTATGCCCAAAAACCGG
CGCCGCCTGTGGTCCTCAGGTGA

Protein sequence :
MEMGWLEWLAEPLRYPFMQRALLSALLVGTICAITGSYLIVRRLALLGDAVSRAVMPGLAIAFIVGGNIFVGAFIAGVLS
TALIGYIHTHSKIKEDTAMGLVFSGFFATGIILITKIQSETKVDLMHFLFGNILGVSESDLLATAVISAAVVATILLLFK
ELLFHSFDPLGAKAAGLPTEVLHLVLMSLIALTIVASMQSVGVVLVIALMIAPGATAYLLTRRLPSMMGLAVLLGAIASL
VGLYLSYYLDIASGPAVVVVSIACFVLAFLFSPRQGLLTRLWQDRKADYAQKPAPPVVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-52 46
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-52 46
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-52 45
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-52 45
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-52 45
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-47 42
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 9e-48 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr3313 NP_926259.1 ABC transporter permease BAC0352 Protein 1e-52 46
glr3313 NP_926259.1 ABC transporter permease BAC0442 Protein 8e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr3313 NP_926259.1 ABC transporter permease VFG0528 Protein 1e-52 46