Gene Information

Name : glr3312 (glr3312)
Accession : NP_926258.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3511483 - 3512214 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence : 
ATGCTCACCATCGCCAATCTATCCGTCCGCTACCGCCGCAACCTTGCTCTAAGCGAGGTGAACCTTGCCGTCGAGCCGCG
GCGGATCGTGGGGATCATCGGGCCGAACGGCGCCGGCAAATCGACGCTCATCAAGGCCGTACTGGATCTGATCCCCGCCG
GGGGTAAAGTCACCCTGGACGGCCGGCCGCTCAGGCAGCAGCTGCACCGCGTCGCCTACGTGCCCCAGCGCACGGCGGTC
GATTGGGACTACCCGGCGACGGTCGCGGACGTGGTGATGATGGGCCGCTGCCGCCACATCGGCTGGCTGCGCCGGCCCGG
CCGGCCCGACCGTGAAGCGGTGAAATCGGCCCTCGAACGGGTGGGCATGACCGAGTACGCCAACCGCCAGATAGGCGAAC
TCTCCGGCGGCCAGCAGCAGCGGGTGTTTCTGGCCCGCGCCCTGGCTCAACAGGCGGACTGGTTGTTTCTCGATGAACCG
TTTGTGGGGGTGGATCAGACCACCGAGGCGGTGCTGTTTGCGATTTTTAGGCAGCTGCGCGACGAGGGTAAGACGCTGCT
AGTGGTCAACCACGACCTGGGCGAGGCGGTGGATCACTACGACGACATTTTGCTGCTACGCAACCGGGTGATAGCCTTCG
GTCCCCGCGAAGACGTCTTCACCGAGGCGAACCTGGCGGCAGCCTACGGCGGTCTGCCGGGCCGCTTCGTCTATTCGGGG
GGCGGGCGCTAG

Protein sequence : 
MLTIANLSVRYRRNLALSEVNLAVEPRRIVGIIGPNGAGKSTLIKAVLDLIPAGGKVTLDGRPLRQQLHRVAYVPQRTAV
DWDYPATVADVVMMGRCRHIGWLRRPGRPDREAVKSALERVGMTEYANRQIGELSGGQQQRVFLARALAQQADWLFLDEP
FVGVDQTTEAVLFAIFRQLRDEGKTLLVVNHDLGEAVDHYDDILLLRNRVIAFGPREDVFTEANLAAAYGGLPGRFVYSG
GGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-50 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-50 47
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-50 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-50 47
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-50 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 5e-50 46
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 7e-50 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr3312 NP_926258.1 ABC transporter ATP-binding protein BAC0400 Protein 2e-53 49
glr3312 NP_926258.1 ABC transporter ATP-binding protein BAC0350 Protein 2e-50 47
glr3312 NP_926258.1 ABC transporter ATP-binding protein BAC0440 Protein 2e-49 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glr3312 NP_926258.1 ABC transporter ATP-binding protein VFG0526 Protein 2e-50 47