Gene Information

Name : gll3310 (gll3310)
Accession : NP_926256.1
Strain : Gloeobacter violaceus PCC 7421
Genome accession: NC_005125
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3509506 - 3510261 bp
Length : 756 bp
Strand : -
Note : -

DNA sequence : 
GTGGTAGTTGGCGATCCTTGCGTATTACTAATCTCAACTTTCATGTTGTCAGTACGCGATCTCAACGTGAGCTACGGCCT
GCGCCCGGCCCTGGAGCGGGTGAGTTTCGATGTAGAAGCCGGGCGGCTGGTAGGGGTGGTAGGCCCGAACGGCGCGGGCA
AGTCGACACTGGTCAAGGCGATCATGGGCGTGGTGCCCCGCCGCTCAGGCGCGGTGCTGTTGGAGGGTGAACCCCTGGAG
AAAGTGCGCGAGCGGGTTGCTTACATTCCCCAGCGCGCGGGCATCGATTGGGATTTCCCGGCCCTGGTGCGCGAGGTGGT
GGCGATGGGCTGCGTGCCCCGCATGGGCTGGCTGGCTCGGCCGGCGCGCGCGGACCGCGAGCGGGTAGAGGCGGCCATCG
AGCGCGTGGGCCTTGCGGATCTGGCCCATCGGCGCATCGGCGAACTGTCGGGCGGCCAGCAGCAGCGGGCCTTCATCGCC
CGCGCCCTGGTGCAGCAGGCGCGGTTGTTTTTGTTTGACGAACCCTTCGCGGGTGTCGATCAGTACACCGAGCGGTCGAT
TTTGGGGATTTTCGAGCAACTGCGCGATGCGGGTTGTGCGCTCCTTATCGTCAACCATGACCTGGGGGATGTGGTGCGCC
ACTACGACGATCTGCTGATTTTGCGCGGTGAGGTGGTCGCCTACGGGCCGCGCGAGGATGTGTTTACCCAGGCCAATCTC
AACCGGGCCTACCTGGGGCCGGTGGCTGCCGTCTAG

Protein sequence : 
MVVGDPCVLLISTFMLSVRDLNVSYGLRPALERVSFDVEAGRLVGVVGPNGAGKSTLVKAIMGVVPRRSGAVLLEGEPLE
KVRERVAYIPQRAGIDWDFPALVREVVAMGCVPRMGWLARPARADRERVEAAIERVGLADLAHRRIGELSGGQQQRAFIA
RALVQQARLFLFDEPFAGVDQYTERSILGIFEQLRDAGCALLIVNHDLGDVVRHYDDLLILRGEVVAYGPREDVFTQANL
NRAYLGPVAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-43 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-43 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-43 43
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-42 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-42 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-27 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-27 42
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-41 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-41 41
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 8e-27 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gll3310 NP_926256.1 ABC transporter ATP-binding protein BAC0400 Protein 6e-49 46
gll3310 NP_926256.1 ABC transporter ATP-binding protein BAC0440 Protein 9e-44 44
gll3310 NP_926256.1 ABC transporter ATP-binding protein BAC0350 Protein 1e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gll3310 NP_926256.1 ABC transporter ATP-binding protein VFG0526 Protein 9e-44 43